Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1736 ATGCAGACCAGCTGTGTTGTGGACGAAAAATTTGTCCCAAAGGTGGGAATAATTTTCAAGACCCTAGAAGAAGTTAGAAAGTTCTACAAACATTATTCCAAACTTGCTGGTTTTTCCACCAAAATAAGGAACACGACTCGGGATGGAAACAAGATTAAGAATCAACTAATTGTATGCTCTAGAGAGGGGAGGTGGAAATCAAAGATATCTCCGACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCCTGCCAGAATTTACGTACATATAATGAAGGATGTTAGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCACTCACATCCTTATTGTCCAGACCAGGTTGAGATGCTCAAACAACACAGGGAGCTTAGCATTTTCGTGCGTCGCACCATTGAAACCCACGAGGAAGCTGGAATCAGACCGAGCAAAACCTACCAATCATTTGTGGCAGCAGCTGGCAGCCACCCTGTACGAGGATCGGCATATATGGATTCCGATTTACTTGGATCACCACTTTTGAGCTGGGATGAGAAGCACACAAAGGAGCGAGAGTATGCATTCATTTTTCAACAAGTTTTCAACTCCACATTCAACAAGTTTATCGTCACCTATGACGCAGTATCACGAGATGTAAAGTGCCATTGCTTGCTGTTTGAGTTTAGGGGCATATTGTGCCGCCATTCCCTAAGCGTTCTAAGCTTTGAGCGAGTGGATAACGTGACACCTAAATACATATTGGAACGCTGGAGTAAGAACATAAAGAGGAGGCATACACACATCAAGAGCAGCCAAGATGAACCTGTACTGGAGCCAAGAAGTAAGAGATTTGACGAATTGGTGTCTCGGTCACACAATATATGTAAATTTGCATCCAAGTCTTAA 888 0.4245 MQTSCVVDEKFVPKVGIIFKTLEEVRKFYKHYSKLAGFSTKIRNTTRDGNKIKNQLIVCSREGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVSLWTISKVVLNHSHPYCPDQVEMLKQHRELSIFVRRTIETHEEAGIRPSKTYQSFVAAAGSHPVRGSAYMDSDLLGSPLLSWDEKHTKEREYAFIFQQVFNSTFNKFIVTYDAVSRDVKCHCLLFEFRGILCRHSLSVLSFERVDNVTPKYILERWSKNIKRRHTHIKSSQDEPVLEPRSKRFDELVSRSHNICKFASKS* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1736 295 PANTHER OS03G0843700 PROTEIN 196 271 - -
Amo15g1736 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 136 IPR031052 GO:0006355
Amo15g1736 295 SMART 26again6 213 240 IPR006564 GO:0008270
Amo15g1736 295 ProSiteProfiles Zinc finger SWIM-type profile. 202 238 IPR007527 GO:0008270
Amo15g1736 295 Pfam FAR1 DNA-binding domain 27 111 IPR004330 -
Amo15g1736 295 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 196 271 IPR031052 GO:0006355
Amo15g1736 295 PANTHER OS03G0843700 PROTEIN 9 136 - -
Amo15g1736 295 Pfam SWIM zinc finger 212 235 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1736 Amo-Chr15 117504250 117506269 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g1736 FAR1 2.3e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1736 - - adu:107484182 420.624