Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1716 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTCTACACCTTATTCCTGTGCTTCATTCTATCTATATTCCTATTTTGGATAATCATATCTCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACAGGAATTTCGCTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTCGAAGGACAAAACTCGATTCGACTCGGCTCAAAGCAAATCGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTAGAATAAGGGCTAAGTTTGGGAGGTTCAAGAGCAGCCGATTCAATCCACCGGTTGTTCAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGGTAAACCGCCGGCAGCAACTTTTAGTGTTACAAGAGGCTTAGAAATTTGGTATATTGAGAACCAGCRGTTGGTTCCAGTGTCAAAATCAAGCCATGGAAGATTCTATACTGAAAGTGCAGTTTTTGCTGCATCTTCAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATATGCGTGGTACAAAGACAGGAATTTCGCTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCGTGTTCGAAGGACAAAACTCGATTCGACTCGGGCCAAAGCAAATTGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTACGATAAGGGCTAAGTTTGGGAGGTTCAAGAGCGGCCGGTTCGATCCTCAGTTTGTTAAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGCTAAACCGACGGCAACATTCAATGTTAGAAGGTGCAGTAGTCCTTATTTCTTTCAGGATCGGGATGATGAGGGATAG 1104 0.4556 MCLRSFRCSFCCIFVTLYTLFLCFILSIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTTLNYKFKVNITARNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAVFEGQNSIRLGSKQIAEYNMERSVGIFNDLAVDLDVRIRAKFGRFKSSRFNPPVVQCRRLRVPLISNGKPPAATFSVTRGLEIWYIENQXLVPVSKSSHGRFYTESAVFAASSNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAVFEGQNSIRLGPKQIAEYNMERSVGIFNDLAVDLDVTIRAKFGRFKSGRFDPQFVKCRRLRVPLISNAKPTATFNVRRCSSPYFFQDRDDEG* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1716 367 PANTHER HARPIN-INDUCED 1 19 196 - -
Amo15g1716 367 PANTHER HARPIN-INDUCED 1 228 358 - -
Amo15g1716 367 PANTHER OS05G0367900 PROTEIN 19 196 IPR044839 GO:0098542
Amo15g1716 367 PANTHER OS05G0367900 PROTEIN 228 358 IPR044839 GO:0098542
Amo15g1716 367 Pfam Late embryogenesis abundant protein 68 167 IPR004864 -
Amo15g1716 367 Pfam Late embryogenesis abundant protein 229 317 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1716 Amo-Chr15 117068543 117074961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1716 34 181 SNARE and Associated Proteins AT1G32270 31.757 1.74e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1716 - - gmx:100784278 243.047