Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1710 GGTGATTCTGAGAAGTTGAMAAATGTGTTATTTGAGCTTGCKAGARGCCATGCCCCCTCAACCATATTTCTTGATGAAATTGATGCAATCATTAGRCAACGCGGTGAAGCACGCAGTGAACATGAAGCAAGTAGACGACTAAGAACTGAACTACTCATACAGAATCATTTCCTTGTCTGCCGCAGGGATTTTCTTCAAGAAGAAGCATTAATTCATTCATTCGCAGCTATTGGTCTTACGGCTTGCATTGTGCTTGCTGTTTTTGCAATGGCTACAAGCCTCAGGATGTACACAGCTTGTCAGCATCTTCAAGCTCAGGCCAGGGCTCATGCAGCAGCAACAACTGGATTGCGTAGCCATACCGAATTATGGCTTCATGTGCCACCATCCATAGAGTTTGTTCTATATGAATTTTCCAAATATATGAAGAGATTACAAGCATAA 444 0.4212 GDSEKLXNVLFELARXHAPSTIFLDEIDAIIRQRGEARSEHEASRRLRTELLIQNHFLVCRRDFLQEEALIHSFAAIGLTACIVLAVFAMATSLRMYTACQHLQAQARAHAAATTGLRSHTELWLHVPPSIEFVLYEFSKYMKRLQA* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1710 147 Pfam ATPase family associated with various cellular activities (AAA) 1 54 IPR003959 GO:0005524|GO:0016887
Amo15g1710 147 PANTHER KATANIN 1 64 - -
Amo15g1710 147 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 52 IPR027417 -
Amo15g1710 147 Gene3D - 1 55 IPR027417 -
Amo15g1710 147 PANTHER AAA DOMAIN-CONTAINING 1 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1710 Amo-Chr15 116869043 116870380 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1710 83 131 C3H Transcription Factor Family AT3G55530 71.429 7.95e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1710 K07767 - ahf:112750922 101.679