Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1695 ATGGCTAGTCTTAAAAATGATGAGCTGCCAATGCTGTYGAGAAAGGAATCAAAGGATGAAGAACAATATGATGAGACCCTGAATTCCAAATTGCAGAGATTCTTATCCAGGACACAAAGTTCAATTGCAATTCCTATGAGCACCCTGGAGTCATATGATAGCGAAACTAGTCTTGTTGGACACACTGGTCCACTGAAGAGTGAGAGAAAAACCCCCTTTCCACAAATGAGCGGTCCACTATATGCTGCCGGAACTGGAAGTCATTTACAGCAGAGGATGGTTGGTACAGGAAGAAAAGAAGATGAAAGAAAGACAGAAAAATTTGATGCTTTCCGTGGCACCGGTTCGAATAACTGGCATAATAACCATGATAAGGAAAATCAACACTTAATGAGGTCTGGACAACTTGGAATGTGTAATGATCCTTATTGCACTACTTGCCCGACATACTTCAAGTCTTCTCAACATAAAAATTCAAAATCTTCGACAATATTTGATCCCAAGTTCCACAATGCTCTCTATGGGGACGCCAAGGGATTTGCAACAAAGTTTTATTCCCTTTGTCGTTCGTACATTCCTGGAGTTATAAATCCTCACACTAAAGTCATACAACAATGGAACAAGATTTTGGCCATTTTTTGCTTGGTTGCTATTTTTGTGGATCCATTATTTTTCTTTGTATTTTATGCACGAGAGGATCATAATTGTGTTGTTATCGACTGGTCAATGACAACAACACTTGTTATTGTTCGAAGCTTGAATGATTTGGTATATTTCTTTAACATTCTTCTCCAGTTCAAATTGGCTTATGTTTCTCCTGAGTCAAGGGTGGTTGGTACTGGAGATTTAGAGGACCATCCGAAGGAAATCGCACTTCATTACCTTCGGGGTTATTTTTTTCTTGACTTATTTGTTGTATTTCCTCTTCCTCAGATAATGATATTGTTTGTCTTGCCAAAATCCCTTGGGGGAGCAAATTATGCTAAGAATCTTCTGCGTGCAGCGATCCTTGTGCAGTACATCCCCAGATTGTTTAGATTTCTGCCTATGCTAATTGGCCAGTCTCCATCAGGATTTATATTTGAGTCAGCCTGGGCAAATTTTATAATAAACCTTCTAATTTTTATGCTATCTGGACATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTCTGCAGAGGGTTAACCAATGTTTGCGAGATGCCTGCCACAATTCTAAGATCCCCGGATGCATGGTATTCATTGATTGTGGGCATGGTCATGATGGAGTCTTTCAGCCTGACCAAACATCAAATCAGTGGAACAACAATACTGATGCTGTTGCTTGCTTGAATCCCCCATCTAATGGTGGTTTTTCTTATGGGATATATCAAAATGTTGTACCTCTTACTACAGAAACTAATGTGATCAACAAATACATCTATTCTTTGTTTTGGGGATTCCAGCAAATCAGTACTTTGGCTGGTAATCTAGTCCCTAGCACTTTTGTGTGGGAAGTCCTTTTCACTATGGCCATTATAGGATCTGGACTCTTGCTTTTTGCTATTCTCATTGGTAACATACAGAATTTTCTTCAAGCTCTTGGGCGGAGGAGGCTAGAAATGCAACTCAGGGGACGTGACGTGGAGCAATGGATGAGCCATCGACGCTTACCAGAAAATCTAAGAAGGAGAGTACGACAGGCTGAACGTTATTCTTGGGCTGCAACAAGGGGAGTTAACGAAGAAATGCTTATGGAAAATTTACCAGAAGATCTACAGAGAGACATAAGGCGTCATCTCTTCAAATTTATTAAGAAAGTTCGAATTTTTGCTTTGATGGATGAACCTATCCTAGATGCCATTTGTGAGAGATTAAGACAAAGGACATACATAAAAGGAAGTATTATATTGAGTATGGGTTGTCTGGTAGATAAGATGGTATTCGTGGTGCGAGGAAAGCTCGAGAGTGTCGGAGAAGATGGAATAAGACTTCCGTTATCCGAAGGGGATGCCTGTGGCGAAGAACTTCTAACATGGTATTTAGAACATTCTTCTGTCAGCACAGATGGTAGAAAAGTAAGGCTTCCTGGACAAAGGTTGCTTAGCAACAGAACAGTGAGGTGCTTAACAAATGTAGAGTCATTTTCGCTCCGCGCCGCAGATCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGGAGTCCGCGTGTTCAAGGAGCCCTAAGGTATGAATCACCTTATTGGAGATCCTTAGCTGCAATTCGTATTCAAGTTGCATGGAGATACAGGAAGAAACGTCTAAGTCGTGCTGATTCTGCTGTTTAA 2307 0.4075 MASLKNDELPMLXRKESKDEEQYDETLNSKLQRFLSRTQSSIAIPMSTLESYDSETSLVGHTGPLKSERKTPFPQMSGPLYAAGTGSHLQQRMVGTGRKEDERKTEKFDAFRGTGSNNWHNNHDKENQHLMRSGQLGMCNDPYCTTCPTYFKSSQHKNSKSSTIFDPKFHNALYGDAKGFATKFYSLCRSYIPGVINPHTKVIQQWNKILAIFCLVAIFVDPLFFFVFYAREDHNCVVIDWSMTTTLVIVRSLNDLVYFFNILLQFKLAYVSPESRVVGTGDLEDHPKEIALHYLRGYFFLDLFVVFPLPQIMILFVLPKSLGGANYAKNLLRAAILVQYIPRLFRFLPMLIGQSPSGFIFESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHNSKIPGCMVFIDCGHGHDGVFQPDQTSNQWNNNTDAVACLNPPSNGGFSYGIYQNVVPLTTETNVINKYIYSLFWGFQQISTLAGNLVPSTFVWEVLFTMAIIGSGLLLFAILIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPENLRRRVRQAERYSWAATRGVNEEMLMENLPEDLQRDIRRHLFKFIKKVRIFALMDEPILDAICERLRQRTYIKGSIILSMGCLVDKMVFVVRGKLESVGEDGIRLPLSEGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLLSNRTVRCLTNVESFSLRAADLEEVTILFTRFLRSPRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSRADSAV* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1695 768 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 4 767 - -
Amo15g1695 768 Gene3D - 207 527 - -
Amo15g1695 768 SUPERFAMILY cAMP-binding domain-like 530 719 IPR018490 -
Amo15g1695 768 Gene3D Jelly Rolls 600 724 IPR014710 -
Amo15g1695 768 MobiDBLite consensus disorder prediction 9 24 - -
Amo15g1695 768 Pfam Ion transport protein 208 530 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo15g1695 768 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 767 - -
Amo15g1695 768 MobiDBLite consensus disorder prediction 1 24 - -
Amo15g1695 768 CDD CAP_ED 602 718 IPR000595 -
Amo15g1695 768 ProSiteProfiles cAMP/cGMP binding motif profile. 602 670 IPR000595 -
Amo15g1695 768 SUPERFAMILY Voltage-gated potassium channels 198 530 - -
Amo15g1695 768 MobiDBLite consensus disorder prediction 60 83 - -
Amo15g1695 768 Gene3D Helix hairpin bin 529 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1695 Amo-Chr15 116375124 116382981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1695 5 680 Ion Channels AT3G17700 58.651 0.0 789
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1695 K05391 - gmx:100795427 1229.93