Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1686 ATGCACCAGTCAATTCTTGATGCTATCTGTATGCAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTGTTGTGCATGGAACACTGGAGATCAAGGACACCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGTATAACTTGTTTAACAGATGTGGAGGCATTTGTGGTTGAAGTTACTGACCTTGAAAAGATCCTAACTCGGTTTGCAAAATTCTTGCACACTCCACTTATTGAAGAGGCCATAAAAAGGCACGAAATGCTTGAAAGGCTGCATGAAGAATCAGGAAGCAACCAAGAAGAACCACAGAGTACTACTGTCCCAGAGGAAAATTAG 486 0.4177 MHQSILDAICMQSKWKLYLADSTIMYPGDLIEMIVFVVHGTLEIKDTSGTSVHISDGDACCQELLFWCLQRASSNSSTDGDKLFFPEERFLSTKSITCLTDVEAFVVEVTDLEKILTRFAKFLHTPLIEEAIKRHEMLERLHEESGSNQEEPQSTTVPEEN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1686 161 SUPERFAMILY cAMP-binding domain-like 2 123 IPR018490 -
Amo15g1686 161 MobiDBLite consensus disorder prediction 141 161 - -
Amo15g1686 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 1 135 - -
Amo15g1686 161 Gene3D Jelly Rolls 1 121 IPR014710 -
Amo15g1686 161 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1686 Amo-Chr15 116174206 116185997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1686 1 78 Ion Channels AT3G17700 41.026 2.37e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1686 K05391 - qsu:112012074 120.938