Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1685 ATGACTAATTTTGAGAAAGAAGAGGCAGCACTTCCAGAAAATCAAGCACAAGTATCTGTATCTCATAAGAGACATGCTAGTTTTGAGGGACATGGTTGGCCAGTTACTAGTAAGAGAACAAGTCCCCTTATGAACATGAGTGGTCCAATATATGCTACCAATGGAACTGGAAGCTTTTTGCACCAGGGTCTAGTTGTGACAGTAAACAAAGTTTGGAGTAACACAGAAAAATCTTCCAGTTCATCTGGCTCGGGCGAAAATCATTGGAACAACAAGTATGCTAGAAAGAATGAACACTTGCTTAACTCCGGAGAACTTGGAATGTGTGATGATCCTTATTGTACTACTTGTCCTGCTAACTTCAAGGATTCTCATAGGAGAAATTCAAAAGCTTCAACAGCTTTTGATGCTAAGTTACATGGTGCTCTCTATGGGGATGCCAAGTGTTACGCAAGAAGACTCTTCTCCTTCTGCTCTTCATTCTCTCCTGGAATTATTAACCCTCACACTAAACTTGTACAACAATGGAACAAGTTCCTGGCTATTTCTTGTTTATTTGCAATCTTTTTGGATCCGTTATTTTTCTTCCTGATCTATGTGCAGAAGGATTGCAAATGTATTGCTATAGATGGGAAAATGGCGTCAACACTAGTTATATTTAGAAGTGTGAATGATTTTGTATATTTCTTAAACATCCTTCTCCAGTTTAGGTTGGCTTATGTTTCTCCAGAGTCTAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTACATTACTTGCGGACCTATTTTCTCATTGACTTATTTGTTGCACTTCCTCTTCCGCAGATAATGATAGTGTTTGTGCTTCCAAGGAATTTGGGGATGTCATCAGGAGCGAATTATGCTAAGAATATTCTTCGCGCGGCCGTTCTTGTGCAGTATATTCCCAGGTTATTCAGGTTTCTTCCATTGCTAATCGGCCAATCTCCATCAGGATTCATATTTGAGTCAGCATGGACAAATTTCATCATAAATCTTCTTATTTTTATGCTGTCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGGTGTGCAGAGGGTTAATCAATGTTTGCGAGATGCATGTCATAATTCTGATATTGATGAATGCATGAAAGTCATTGATTGTGGGCATGGTCGTACTTTAGACGATCAATCTGGCAAAACATCTGCTGGTTGGATCAACAATGTTGAGGCCATTGCTTGTTTAAATCCCTCTTCTAAGGCTTCTAATGGCTTTAGTTATGGGATCTATGCCAATGCTGTACCACTTACAACAGAAACTGACCTTGTCAACAAATATTTGTATGCTTTGTTTTGGGGTTTCCAGCAAATAAGTTCTCTCGGCAGTAGTCTAATCCCAAGTTATTTTGTGTGGGAAGTGCTTTACACAATGGCAATCATAGGATTGGGACTCTTGCTTTTCGCGCTTCTCATTGGAAATATACAGAACTTTCTTCAGTCTCTTGGTCGGAGAAAGCTTGAAATGCAACTTAGAGGCCGTGATGTCGAGCGATGGATGAGCCATCGTCACTTGCCAGAAGATCTAAAAAAGAGAGTGCGCCAGGCCGAACGGTATAATTGGGCTGCAACAAGGGGAGTGAATGAAGAAATACTTATGGAAAATTTGCCAGAAGATCTTCAGAGAGACATAAGGCGTCATCTCTTCAAATTTATCAAGAAAGTCCGAATTTTCGCCTTGATGGATGAGCCAATCTTAGATGCTATTTGTGAGAGAATAAGACATAAGACATACATCAAAGGAAGTAGAATTTTGAATCATGGTGGCATTATAGAGAAAATGGTCTTTGTTGTTCGCGGGAAATTGGAGAGCGTTGGAGTTGATGGAATCGTAGTTCCTTTAGCTGAAGGGGATGCTTGTGGTGAAGAACTTTTGACATGGTATCTTGAACATTCTTTGGTGAGAACAGATGGTAAGAAAGTAAGACTTCCAGGACAGAGGTTGCTTAGCAACAGGACGGTGAAGTGCTTAACAAATGTGGAGGTATTTTCACTCCGAGCAGCAGATCTTGAAGAAGTCACGATCTATTTCACAAGATTCTTGAGGAGTCCACATGTTCAAGGAGCTCTAAGGTATGAATCACCTTATTGGAGATCACTTGCAGCAACACGAATTCAGGTTGCCTGGAGATACAGGAAGAAACGTCTGAGTCGTTCTGATAGCCAAACAATCTAA 2235 0.4058 MTNFEKEEAALPENQAQVSVSHKRHASFEGHGWPVTSKRTSPLMNMSGPIYATNGTGSFLHQGLVVTVNKVWSNTEKSSSSSGSGENHWNNKYARKNEHLLNSGELGMCDDPYCTTCPANFKDSHRRNSKASTAFDAKLHGALYGDAKCYARRLFSFCSSFSPGIINPHTKLVQQWNKFLAISCLFAIFLDPLFFFLIYVQKDCKCIAIDGKMASTLVIFRSVNDFVYFLNILLQFRLAYVSPESRVVGAGDLVDHPKKIALHYLRTYFLIDLFVALPLPQIMIVFVLPRNLGMSSGANYAKNILRAAVLVQYIPRLFRFLPLLIGQSPSGFIFESAWTNFIINLLIFMLSSHVVGSCWYLFGVQRVNQCLRDACHNSDIDECMKVIDCGHGRTLDDQSGKTSAGWINNVEAIACLNPSSKASNGFSYGIYANAVPLTTETDLVNKYLYALFWGFQQISSLGSSLIPSYFVWEVLYTMAIIGLGLLLFALLIGNIQNFLQSLGRRKLEMQLRGRDVERWMSHRHLPEDLKKRVRQAERYNWAATRGVNEEILMENLPEDLQRDIRRHLFKFIKKVRIFALMDEPILDAICERIRHKTYIKGSRILNHGGIIEKMVFVVRGKLESVGVDGIVVPLAEGDACGEELLTWYLEHSLVRTDGKKVRLPGQRLLSNRTVKCLTNVEVFSLRAADLEEVTIYFTRFLRSPHVQGALRYESPYWRSLAATRIQVAWRYRKKRLSRSDSQTI* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1685 744 MobiDBLite consensus disorder prediction 1 40 - -
Amo15g1685 744 Pfam Ion transport protein 179 505 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo15g1685 744 Gene3D - 177 502 - -
Amo15g1685 744 SUPERFAMILY Voltage-gated potassium channels 168 505 - -
Amo15g1685 744 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 38 740 - -
Amo15g1685 744 Gene3D Helix hairpin bin 504 569 - -
Amo15g1685 744 CDD CAP_ED 577 693 IPR000595 -
Amo15g1685 744 ProSiteProfiles cAMP/cGMP binding motif profile. 577 645 IPR000595 -
Amo15g1685 744 Gene3D Jelly Rolls 575 699 IPR014710 -
Amo15g1685 744 SUPERFAMILY cAMP-binding domain-like 505 696 IPR018490 -
Amo15g1685 744 PANTHER CYCLIC NUCLEOTIDE-GATED CATION CHANNEL PROTEIN 38 740 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1685 Amo-Chr15 116132250 116138605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1685 30 654 Ion Channels AT3G17700 58.768 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1685 K05391 - gmx:100781973 1088.17