Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1683 ATGGAGATGCAGGACCAAATCGAAGGCACAAAGCTAAGCAAGTCTGGTACAGCCAGTGACTGCCATTCCAATGATGGATCACAATCCCAATCGCCAGATATAAGTTCTGTTGTGAACAATCATGCCCCCAAGGTGAGGAAACCATATACCATCACTAAGCAAAGGGAGAAGTGGACTGAGGAAGAGCATGAAAAGTTCCTTGAAGCTTTGAAGTTGTATGGTCGGGGATGGCGTCAAATTGAAGAGCATATAGGCACCAAAACTGCTGTTCAGATTCGAAGCCATGCACAAAAGTTTTTCTCTAAGGTTGTGCGGGAMTCGGACGGAAGTGCTGAAAGTTCTATACATCCRATTGACATACCTCCTCCTCGTCCTAAAAGGAAACCCCTTCATCCATATCCYCGTAAATTGGCCAACTCCTTCAAAAGGCACTCCAKACCAAATGAACCAGAAAAATCTCCATCGCCTAATCTGTCCTCTGCGGAGAAAGACTCTCAATCTCCAACCTCTGTGCTATCTGCCTTTGGTTCGGAAGCATTTGGGTCAGCATTTTCAGAGCAKACCAACAGATGCCTTTCTCCGAATTCTTGCACTACTGACATTCAATCAATYAACTTGTCACCTATTGAGAAGGAAAATGATTGCATGACATCTAAACCATCCAAGGAGGAAGACAAAACGCCTCTAGCTTCTGCCGCTTTATCCATTAGCTCACAACCTTACTTGCACATGAAGTCTGAGAAGTTGGAGTTGTGTTCCAAGCAAACCAAGTGTATCAACAAYGATGTTGTCAATGTCCTGCCCACTACTATAAAGCTGTTTGGAAGAACYGTTTCAATGGTCGGTAATCAGGAGTCAATTAATACTGAAGAGGAGTGTGTTAAGCTATGTAYTACTAGGTCTGATGAAGTAGATGATGTTGAGAATCAATTGAATACTCAGTTATCACTAGGCATGTGTAATGGAAGTTGGCGAGTAATGCCTAAAGAAGCTATAGTGACGGGCGCGGAGCATCCGAAGGAGGACCTTGGCCTTGGAGAATCTGCACCTGAAGCATCTTTGGCATGGTCAAGTTTGTTCCCAGGCGGTCYGGCTGCTTACTTTGGTTCATCCAATACAGTCGTAAATCCTATGCCTCTTCACCCCTCCTTAAAAGTAAGAGCTAGAGAGGAGGAAGGTTCTTGTACTGGTTCCAATGGTGAATCAGTCAATGATGTGGAAATTCAGGGCAAGATTCAGGGAAGGTYCTTGGACACCGTCGATTCCAGGTGTCAACAAACATCTCATCAAGAGGAAGTAGTAGTCCCCCAGAAGTCTCCAAGGGGTTTTGTACCATACAAAAGATGTTTAGCTGAAAGAGATGCAAGTTCTTTGATTGTTGCATTGGAAGAAAGGAAGGGGCAAAGAGCTAGGGTGTGCTCATAG 1425 0.4428 MEMQDQIEGTKLSKSGTASDCHSNDGSQSQSPDISSVVNNHAPKVRKPYTITKQREKWTEEEHEKFLEALKLYGRGWRQIEEHIGTKTAVQIRSHAQKFFSKVVRXSDGSAESSIHPIDIPPPRPKRKPLHPYPRKLANSFKRHSXPNEPEKSPSPNLSSAEKDSQSPTSVLSAFGSEAFGSAFSEXTNRCLSPNSCTTDIQSINLSPIEKENDCMTSKPSKEEDKTPLASAALSISSQPYLHMKSEKLELCSKQTKCINNDVVNVLPTTIKLFGRTVSMVGNQESINTEEECVKLCXTRSDEVDDVENQLNTQLSLGMCNGSWRVMPKEAIVTGAEHPKEDLGLGESAPEASLAWSSLFPGGXAAYFGSSNTVVNPMPLHPSLKVRAREEEGSCTGSNGESVNDVEIQGKIQGRXLDTVDSRCQQTSHQEEVVVPQKSPRGFVPYKRCLAERDASSLIVALEERKGQRARVCS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1683 474 MobiDBLite consensus disorder prediction 150 172 - -
Amo15g1683 474 MobiDBLite consensus disorder prediction 1 57 - -
Amo15g1683 474 CDD SANT 57 100 IPR001005 -
Amo15g1683 474 SUPERFAMILY Homeodomain-like 49 103 IPR009057 -
Amo15g1683 474 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Amo15g1683 474 ProSiteProfiles SANT domain profile. 53 104 IPR017884 -
Amo15g1683 474 PANTHER PROTEIN REVEILLE 7-RELATED 3 462 - -
Amo15g1683 474 Pfam Myb-like DNA-binding domain 55 98 IPR001005 -
Amo15g1683 474 MobiDBLite consensus disorder prediction 111 172 - -
Amo15g1683 474 Gene3D - 57 104 - -
Amo15g1683 474 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Amo15g1683 474 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Amo15g1683 474 PANTHER SWI/SNF COMPLEX-RELATED 3 462 - -
Amo15g1683 474 MobiDBLite consensus disorder prediction 8 38 - -
Amo15g1683 474 SMART sant 54 102 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1683 Amo-Chr15 115942014 115946345 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Amo15g1683 Myb_DNA-binding 1.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1683 - - gmx:778089 538.11