Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1660 CTATCTCCATCACCGTCTATGCCTTCGTTAGCCTCTGTGACCTCGATTATAACGCCCCTTGTTTCTGCCTCCAACAGCAGTGTCGCCGCCGTCTCTCACGTCCTAAGCCTCCGTGACCCCTGTGTTCGCCGCCTCCGATCCACCAGCGTAGTCGTGTTCTCCATCACCGTCTCTAACCTCGCCGCCGATCACGCTCCAATTTTCTGCCACCACCGCGCCGGTTGCGCCAATTTCATCATAAACATGAACATCGATGACAATAAGAACTTAGAGGAGTCTATCGAATATGATGAGCTGTGTTTTCGGTATAATAGTAGTTCTGATAAGGAGGAGGAAGATATTATCAACAATGAGGGTAAATTTAGTGAATCCATGGAGGTGTCGAATTGTAGCTATAAAATTCAAGAAGTTGAGAAAAAGTTAAACGAATTAAGCTATGATGACATGTGGGGTATTGAGTTTGACACCGTTGATCAATGTTGTGATTTTTATAGAAATTATGCTAGAGTGCACGGTTTTGTTGCGAGGCTTGACGAAAAAGGACAAGATTTCAATGGAAACCTTAATATGCGACAGATGCTTTGTAACAGAGAGGGTACACATAGAAAAAAGTACTTGGAGATGGAGAACAGAAAAAAGGATCACAAGCCAATCACACGTGTAATATGTCAAGCAAAGATTAGATTTCACTATGACTTGATTTTACAAAAGTGGCGAGTCACCAAATTTGAAGAGACTCACAACCATGACATCATCCCACCTAAGTATATCCAGTTTGTTCCAGCATATCGAACAATGATTGCCGCTGATAAAGCACAGGCTGAT 825 0.4303 LSPSPSMPSLASVTSIITPLVSASNSSVAAVSHVLSLRDPCVRRLRSTSVVVFSITVSNLAADHAPIFCHHRAGCANFIINMNIDDNKNLEESIEYDELCFRYNSSSDKEEEDIINNEGKFSESMEVSNCSYKIQEVEKKLNELSYDDMWGIEFDTVDQCCDFYRNYARVHGFVARLDEKGQDFNGNLNMRQMLCNREGTHRKKYLEMENRKKDHKPITRVICQAKIRFHYDLILQKWRVTKFEETHNHDIIPPKYIQFVPAYRTMIAADKAQAD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1660 275 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 93 267 - -
Amo15g1660 275 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 93 267 - -
Amo15g1660 275 Pfam FAR1 DNA-binding domain 162 252 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1660 Amo-Chr15 115273119 115287737 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g1660 FAR1 1.8e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1660 - - aip:107607226 384.415