Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1653 ATGAAGAAGAATGAGAGTGGTGGTTATGTAAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAACTACAAAGGCACCTGAGCAGAGCATGGACGATGGAAAAGAACAAAGAAAAGCAGCAGCAAGAAGATGATGCTGCCATGGCTGCTGCTGCTGCTGCTGCTGAAGGAGCAAGGTCATCATCAAGAACAAGGCAAGAATGGGAGATTGACCCTTCCAAGCTCCTAATCAAGTCTGTCATTGCTCGTGGAACTTTTGGCACTGTTCATCGTGGTGTTTATGATGGCCAAGATGTTGCAGTTAAGCTTCTTGATTGGGGGGAAGAGGGCCATCGTTCCGAAGCGGAAATAGCTTCTTTGAGGGCAGCTTTTACACAAGAAGTTGCTGTTTGGCATAAGCTTGACCATCCTAATGTGACCAAGTTCATTGGGGCGACAATGGGAACATCAGATCTACAGATACAAACAGAGAATGGTCACATAGGCATGCCGAGCAACCTCTGTTGTGTTGTGGTTGAGTATTGTCCCGGAGGTGCGCTGAAGTCTTATCTCATTAAAAATCGGCGAAGGAAGTTGGCTTTTAAAGTGGTTGTCCAACTGGCACTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACCGAGATGTTAAAACGGAAAATATGCTTCTGGACAAGACGCGAACCTTGAAGATAGCTGATTTTGGTGTAGCTCGCATCGAGGCTTCCAATCCTCATGACATGACTGGTGAAACCGGAACTCTTGGTTATATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGCGACGTGTACAGTTTCGGTATATGCTTATGGGAGATCTACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCGGAAGTAACATCGGCCGTCGTACGACAGAACCTGAGGCCGGAGATTCCGCGTTGTTGTCCAAGCTCTCTGGCAAATGTGATGAAGAGGTGCTGGGATGCCAATCCCGATAAGCGGCCGGAGATGGACGAAGTGGTGTCGATGCTGGAAGCTATTGACACCTCGAAAGGCGGAGGTATGATCCCTCTTGATCAACCTCAGGGTTGTTTATGTTTCCGGAGGTATCGAGGACCTTGA 1140 0.4737 MKKNESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKQQQEDDAAMAAAAAAAEGARSSSRTRQEWEIDPSKLLIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSDLQIQTENGHIGMPSNLCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHMKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPLDQPQGCLCFRRYRGP* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1653 379 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672|GO:0006468
Amo15g1653 379 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672|GO:0006468
Amo15g1653 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Amo15g1653 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672|GO:0006468
Amo15g1653 379 CDD STKc_MAP3K-like 82 350 - -
Amo15g1653 379 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1653 379 Gene3D Phosphorylase Kinase; domain 1 64 159 - -
Amo15g1653 379 SUPERFAMILY Protein kinase-like (PK-like) 63 350 IPR011009 -
Amo15g1653 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Amo15g1653 379 Pfam Protein tyrosine and serine/threonine kinase 78 350 IPR001245 GO:0004672|GO:0006468
Amo15g1653 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 373 - -
Amo15g1653 379 MobiDBLite consensus disorder prediction 31 67 - -
Amo15g1653 379 MobiDBLite consensus disorder prediction 31 45 - -
Amo15g1653 379 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 373 - -
Amo15g1653 379 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1653 379 Gene3D Transferase(Phosphotransferase) domain 1 176 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1653 Amo-Chr15 115207276 115212126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1653 11 379 MAP Kinase Kinase Kinase AT3G22750 67.292 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo15g1653 PK_Tyr_Ser-Thr 2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1653 - - gmx:100806635 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4515 05 117322365 117327213 Amo15g1653 15 115207276 115212126 hybridization