Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1636 ATGATGGACGAGCCTATTTTAGATGCCATTTGTGAGAAGTTAAGACACAAGATATACATCAAAGGAAGCAATATCTTGTATAATGGTGGTCTAGTGGAGAAGATGGTCTTTGTTATGCATGGGAAATTGGAGAGCATCGAAGGAGAAGATGGAATTAGAATGAGCTTAACCCAAGGGGATGCTTGTGGTGAAGAACTCTTGCAGTGGTGTTTGGAGAATTCATTACTCTACACAGCAAGCAGAAAAATAAGATTTCCAGAAAAAGTCTTACTTAGTGAAAGGACAGTAAGGGCCTTAACAAATGTGGAGGTGTTTTCACTCCGAGCTGATGACCTTGAAGAAGTAATAATTCGTTTCTCAAGATTATTTCAAAGACCACGTGTTCAAGCAGCCCTAAGGTATGAATCACCTTATTGGAGATCCCTTGCTGCAACACGGATTCAGATGGCGTGGCGATACAGGAAGAACCGATTAAATCGTAAGCGTGCTGCCTCACAAACAAATTAG 507 0.4103 MMDEPILDAICEKLRHKIYIKGSNILYNGGLVEKMVFVMHGKLESIEGEDGIRMSLTQGDACGEELLQWCLENSLLYTASRKIRFPEKVLLSERTVRALTNVEVFSLRADDLEEVIIRFSRLFQRPRVQAALRYESPYWRSLAATRIQMAWRYRKNRLNRKRAASQTN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1636 168 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 1 163 - -
Amo15g1636 168 Gene3D Jelly Rolls 1 121 IPR014710 -
Amo15g1636 168 ProSiteProfiles cAMP/cGMP binding motif profile. 1 67 IPR000595 -
Amo15g1636 168 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 163 - -
Amo15g1636 168 SUPERFAMILY cAMP-binding domain-like 2 122 IPR018490 -
Amo15g1636 168 CDD CAP_ED 2 116 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1636 Amo-Chr15 114764550 114765609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1636 2 152 Ion Channels AT1G19780 41.026 1.06e-28 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1636 K05391 - ahf:112748967 328.176