Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1635 ATGGCTAACTTCGAAATAGAAGAGGAGCCAATGCTGTCACCTCCACAACGATCTGATGGACTCCGGGGTTCGGATTTTCAGGCCCGAAGCAGGTCTATGCACATTCCCATGGTCTCCCACCGAGAAGCAATTCGTACACTTGATAGTGTGAAAACCTTTCCCCAGAAGAAGAGTGGTTCATCGTCATTCTATTCCACTGCCACTCATGAAACTGTACATCTTTCCTCGTCCCGCCGCGGCGGCACAAGCCAACATTCACCCACGTCTGGCCCACTTAGATGGCATCGTGCTATGACAGGAAGGCTTCAATATAATCCTCTTCGAGCAGAGTTTGATAGTATTTTTGAGGGTTCTGCTTGGAGAGTCCCTTCATTCTGCTCTTCATGTGTTCCTGGAGTTATACATCCTGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGCGGCAATATTTTTGGATCCATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTGCATTGTTATCAGTCGGACAATGACGAGACCACTTGTTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTCCAGTTTAGGTTGGCTTATGTTTCTGCGGGGTCAAGGTTAAGGGGTACTGATTTAATTGACGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTACCACAGATAATAGTATTGTTTGTGCTGCCAAGATACTTCGGTGCGAGTCATGCTGAGAGTCTTTTATGTGGAGTGATCCTTGTGCAGTATATCCCCAGGTTATTCCGATTTTTGCCTCTGCTAATTGTCCAGTCTCCAGAAGGATTCATATTTGAGTCAGCATGGACAAATTTTGTTATAAATATCCTCATTTTTATACTATCTGGACATGTCGTTGGCTCTTGTTGGTACCTCTTTGGTTTGCAGAGGGTTAATCAATGTTTGCGAGATGCCTGCCATAATTCAGTTGTTACTCAATGCATGAAGATTATTGATTGTGGGTATGACCGTTTCTCACACTATACATCATCAGATTCAGAAATGTGGAGAAACAATGCAAATGCAACTGCTTGTTTGAATTCCTCTTCTGGTGCTTTTGATTATGGGATATACGCCAATGTTGTACAACTTACTACGCATCCTAAAATAGTCAAGAAGTATGTGTATGCACTGTATTGGGGCTTCCAACAAATCAGTACTCTTGCTGGTAATCAAACCCCTAGTGATTTTGAGTTCGAAGTCCTTTTCTTAATGGCAATCACAGGAATAGGACTCTTGCTTTTTGCACTTTTGATCGGAAACATACAAAACTATCTTCAAGCTCTCGGTCAGAGGACACTAGAAATGCAACTTAGAGGCCGTGATGTTGAGCAATGGATGAGCCAGTTTCACTTACCAGAATATCTTAGAAGGAAAATAAGACATGTTGAACGGTATAATTGGGCTGCAACAATAGGGGTGAATGCAGAAATGCTTATGGAGAATATGCCAGAAGATCTCCAAAGAGACATAAGGCGTCATCTCTTCAGATTCATTAAGAAAGTTTGA 1599 0.4084 MANFEIEEEPMLSPPQRSDGLRGSDFQARSRSMHIPMVSHREAIRTLDSVKTFPQKKSGSSSFYSTATHETVHLSSSRRGGTSQHSPTSGPLRWHRAMTGRLQYNPLRAEFDSIFEGSAWRVPSFCSSCVPGVIHPDSVKQWNKIIAILSLAAIFLDPLFFFLLYVEKHLNCIVISRTMTRPLVLLRSINDLVYFMNMLLQFRLAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLPQIIVLFVLPRYFGASHAESLLCGVILVQYIPRLFRFLPLLIVQSPEGFIFESAWTNFVINILIFILSGHVVGSCWYLFGLQRVNQCLRDACHNSVVTQCMKIIDCGYDRFSHYTSSDSEMWRNNANATACLNSSSGAFDYGIYANVVQLTTHPKIVKKYVYALYWGFQQISTLAGNQTPSDFEFEVLFLMAITGIGLLLFALLIGNIQNYLQALGQRTLEMQLRGRDVEQWMSQFHLPEYLRRKIRHVERYNWAATIGVNAEMLMENMPEDLQRDIRRHLFRFIKKV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1635 532 MobiDBLite consensus disorder prediction 72 93 - -
Amo15g1635 532 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 105 532 - -
Amo15g1635 532 Pfam Ion transport protein 142 463 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo15g1635 532 MobiDBLite consensus disorder prediction 1 27 - -
Amo15g1635 532 Gene3D - 142 459 - -
Amo15g1635 532 MobiDBLite consensus disorder prediction 72 90 - -
Amo15g1635 532 Gene3D Helix hairpin bin 462 526 - -
Amo15g1635 532 SUPERFAMILY Voltage-gated potassium channels 139 457 - -
Amo15g1635 532 SUPERFAMILY cAMP-binding domain-like 461 527 IPR018490 -
Amo15g1635 532 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 105 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1635 Amo-Chr15 114757191 114764540 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1635 74 532 Ion Channels AT3G17700 53.066 4.48e-157 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1635 K05391 - gmx:100785556 556.984