Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1634 ATGTGTTTTGGAGTTATACATCCAGACAGTGTAAAACAATGGAACAAGATTATAGCTATTTTAAGCTTGGTGGCAATATTTTTGGATCTATTATTTTTCTTCTTATTGTATGTTGAAAAGCATTTGAATTACATTGTTATCAGTTGGACAATGACGAGACCATTTATTTTACTTAGAAGCATAAATGATTTAGTATATTTCATGAACATGCTTCTTCAGGTTGCTTATGTTTCTGCTGGGTCAAGGTTAAGGGGTACTGATTTAATTGATGATCCAAAGAAAATTGCTCGACATTACCTGACTAGTTATTTCTTTCTTGATTTGTTTATTGCACTTCCTCTATCACAGAGTTTGGATTTATTTGTAGACTTTCAATCTTACTTTATGGTTTAA 393 0.3104 MCFGVIHPDSVKQWNKIIAILSLVAIFLDLLFFFLLYVEKHLNYIVISWTMTRPFILLRSINDLVYFMNMLLQVAYVSAGSRLRGTDLIDDPKKIARHYLTSYFFLDLFIALPLSQSLDLFVDFQSYFMV* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1634 130 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 6 121 - -
Amo15g1634 130 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 6 121 - -
Amo15g1634 130 SUPERFAMILY Voltage-gated potassium channels 11 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1634 Amo-Chr15 114747829 114749267 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1634 4 116 Ion Channels AT3G17690 47.458 2.42e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1634 K05391 - gmx:100794895 122.479