Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1627 ATGATAAGAGAGGTGTCAGGAAAACTTTCAGAGTTGAAGACTACCATCGATTTGAGGAGGGAAAAAGCCATTTATCACACCCTAAATATGCTTAGCTTTAATGTGACGAGAAAATGTCTCCTTGCAGAAGGTTGGTGTCCTGTTTTTGCGACAAGTCAGTTGCTAATACCTGACAGAGTTGCCAAGTGCCAGGAGGCAAATCCCGGTGTATACACAATCATCACCTTTCCGTTCCTTTTCGCTATCATGTTTGGTGACTGGGGCCATGGCATATGCATATTGCTGGCTTCTTTGTACTTCATAATCAGAGAGAAAAAGTATTCGAGTCAGAAACTTGGAGACATCATGCAAATGGCATTTGGCGAACGCTATATTATTGTGATGATGGCAATCTTCTCAATCTACACTGGCTTCATATACAATGAATTCTTCTCTATCCCGTTTGCTATATTTGCACCATCTGCCTATGCATGCCGTGATCCATCATGCAGTTAA 495 0.4182 MIREVSGKLSELKTTIDLRREKAIYHTLNMLSFNVTRKCLLAEGWCPVFATSQLLIPDRVAKCQEANPGVYTIITFPFLFAIMFGDWGHGICILLASLYFIIREKKYSSQKLGDIMQMAFGERYIIVMMAIFSIYTGFIYNEFFSIPFAIFAPSAYACRDPSCS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1627 164 Pfam V-type ATPase 116kDa subunit family 14 53 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo15g1627 164 Pfam V-type ATPase 116kDa subunit family 60 158 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo15g1627 164 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 59 162 - -
Amo15g1627 164 PANTHER VACUOLAR PROTON ATPASES 59 162 IPR002490 GO:0033179|GO:0046961|GO:1902600
Amo15g1627 164 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 19 54 - -
Amo15g1627 164 PANTHER VACUOLAR PROTON ATPASES 19 54 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1627 Amo-Chr15 114381939 114385167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1627 1 164 Primary Pumps ATPases(2) AT4G39080 54.545 8.43e-77 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1627 K02154 - qsu:111995652 247.669