Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1624 ATGGCGCGGCAGATGCGGCAAAGAGGGGATATTCGTGCGGCGCAGATGATGAGGATGAAGGATCTTTGGTTGAACCGCGATAAGCGAATCGTCGGAGCAATTTTCGGTGTGTATGTTGGCGACGTGTTCCTCTTTCGGATGGAATTGTGTGTCCTTGGATTGCATGCTTCCATGAGCCCTAACAATGAGCCAACTGCAACGAGTGTTATTGTCTCCGGTGGCTACGAGGATGATATGGACGAAGGAGATGTCATAATCTACACTGGACAAGGCGGGCAGGCCATGAATTATAAAAAAAAATATTCATTTAATATGAAAAAATATCCTAATACTTAA 336 0.4524 MARQMRQRGDIRAAQMMRMKDLWLNRDKRIVGAIFGVYVGDVFLFRMELCVLGLHASMSPNNEPTATSVIVSGGYEDDMDEGDVIIYTGQGGQAMNYKKKYSFNMKKYPNT* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1624 111 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE FAMILY MEMBER SUVH2-RELATED 4 100 - -
Amo15g1624 111 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 4 100 - -
Amo15g1624 111 Pfam SAD/SRA domain 31 99 IPR003105 -
Amo15g1624 111 SMART G9a_1 27 111 IPR003105 -
Amo15g1624 111 Gene3D - 12 108 IPR036987 -
Amo15g1624 111 SUPERFAMILY PUA domain-like 14 102 IPR015947 -
Amo15g1624 111 ProSiteProfiles YDG domain profile. 32 111 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1624 Amo-Chr15 114138753 114139121 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1624 7 94 Su(var)3-9 homologs AT5G04940 40.404 1.30e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1624 K11420 - aip:107626851 174.481