Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1622 ATGCCGTCTCTTCCCTCTTTGTCAAGCCCAGACCTGTCTTCGTCGTCATCGTCGTCGGTTTGTACCTGCTGCTGGCTCGTCTTCTCGTCTCTGGCGCGAAACAAATCTCCAATCGTGAATCCTTGCCACCGTGTAGCACCGCCCGTCAGTACCAGTTGCGTGGTGCTTCCCCCTGCTAGTGGATCCACCGCCGATCTGCTCTCTCCTCTTTCTGGTCCTGATCCTAGGAAAAGTCAGGTAAATAAGTTAATTTGTATTACAACAGCAGCGTCACCAAGTAGTAGACAAGGTGAGGAAGTAGTTCCCTCTGATCTATGGGCTTGGAGAAAATACGGTCAAAAACCCATTAAAGGTTCTCCATATCCAAGGGGTTACTATAGATGCAGCAGCACAAAGGGTTGCCCTACAAGGAAACAAGTGGAGAGAAGCAGAACAGACCCAAACATGTTCAGAATTCGGTCTCTAGGAGCTGCCTGTCGCATTGCCGTCTCTGCCAGCATCGTCATCGTCAGTTCAGGCCTGTTGCTGGCCCGTCTTCTCTTCTCCGGTGCACACCCGTTCCTATGGTGCAAGGGTGAGGAACTGCCACCAGACATCGCTGCAGGGATGAATTTCGTGGAAGGACCAAGTGAAAAATAG 639 0.5133 MPSLPSLSSPDLSSSSSSSVCTCCWLVFSSLARNKSPIVNPCHRVAPPVSTSCVVLPPASGSTADLLSPLSGPDPRKSQVNKLICITTAASPSSRQGEEVVPSDLWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPTRKQVERSRTDPNMFRIRSLGAACRIAVSASIVIVSSGLLLARLLFSGAHPFLWCKGEELPPDIAAGMNFVEGPSEK* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1622 212 SUPERFAMILY WRKY DNA-binding domain 99 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo15g1622 212 Gene3D WRKY domain 77 153 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo15g1622 212 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 64 152 IPR044810 GO:0003700
Amo15g1622 212 PANTHER WRKY TRANSCRIPTION FACTOR 14-RELATED 64 152 - -
Amo15g1622 212 SMART WRKY_cls 102 161 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo15g1622 212 ProSiteProfiles WRKY domain profile. 97 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo15g1622 212 Pfam WRKY DNA -binding domain 104 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1622 Amo-Chr15 114112039 114115147 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1622 76 152 WRKY Transcription Factor Family AT2G34830 76.623 3.84e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo15g1622 WRKY 1.7e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1622 - - aip:107634728 145.206