Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1617 ATGGATAGAAGGGGTTGTTACAAGGAATTGGTGCCATTTGTGGTGCTTGTGGCGATTGAATGCAGCAACACAGGCTTGTTCACTCTCTTCAAAGCAGCCAGCAATGGAGGCATGAGCAACTATGTCTTTGTTCCATATGCTTATTCTGTTTCAACCATTGTACTCTGTCCTATCACTTTCTTCTATAGAAGATCAAGAGTGGTTCCTCCACTGAGTTTCTCAATCATTTCCAAAATTGCCCTGCTTGGGGTCATAGGATGTTCATCACAGATGCTGGGCTATGCTGGAATTAGTTACAGTAATCCCACACTTTCCTCAGCTATCAGTAATCTCATTCCTGCTTTCACCTTCATACTTGCCATCATTTGCAGGATGGAAAAGATAGATGTAAAAACTAGAACAACCCAAGCTAAAATTGTGGGAAGCATAATATCAATAGGAGGTGCATTTATAGTGACATTCTACAAAGGCCCATCCATCATTATTGCTGATGATTCCCCTTCTCTCCATCTTGTTCAACGATTAAATGGAAACTTTGAATCAGTGGATACAAATTGGGTCATTGGTGGCTTTCTTCTCACAACTGGCAATATCCTACTCACACTATGGTTCATTCTACAGGTGGAAATCTTGAAGGAGTTTCCAGATGAACTATCTATGGTCTGCTTTTACAACTTGTTTGCTGCCATATTTGCATATGCTTTTGGTTTAATAGCAGAGACAAATCCAAGTGCTTGGAAACTAAGACTAGATTTATCATTGGTCTCCATAGTTTGCATTGGAATATTTAATAAGTTCTTGAGCAGTGCAATATATGCATGGGGAATACACTTAAAGGGTCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTGTTATTGCTGTTGCCATGGGTATCATGTTCCTTGGGGATATTCTACATGTTGGAAGCATAATTGGAGCTACAGTAACATCAGTTGGATTTTACACTGTAATGTGGGGCAAAGCAACAGAGGAGAAGGAGGAAGAAGTTGTTGGAAGCCATGAATCACCAACTAGTGAGCATGAGCATGTTCCTCTCTTGCAAAGCTGTAAAACAGTAAATTCTCAAAAGAATGTAGATGTAAATGTATAA 1116 0.397 MDRRGCYKELVPFVVLVAIECSNTGLFTLFKAASNGGMSNYVFVPYAYSVSTIVLCPITFFYRRSRVVPPLSFSIISKIALLGVIGCSSQMLGYAGISYSNPTLSSAISNLIPAFTFILAIICRMEKIDVKTRTTQAKIVGSIISIGGAFIVTFYKGPSIIIADDSPSLHLVQRLNGNFESVDTNWVIGGFLLTTGNILLTLWFILQVEILKEFPDELSMVCFYNLFAAIFAYAFGLIAETNPSAWKLRLDLSLVSIVCIGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGIMFLGDILHVGSIIGATVTSVGFYTVMWGKATEEKEEEVVGSHESPTSEHEHVPLLQSCKTVNSQKNVDVNV* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1617 371 PANTHER WAT1-RELATED PROTEIN 8 355 - -
Amo15g1617 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 330 - -
Amo15g1617 371 Pfam EamA-like transporter family 27 153 IPR000620 GO:0016020|GO:0016021
Amo15g1617 371 PANTHER WAT1-RELATED PROTEIN 8 355 IPR030184 GO:0016021|GO:0022857
Amo15g1617 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1617 Amo-Chr15 114010865 114013806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1617 8 345 Nodulin-like Gene Family AT5G40240 47.041 6.90e-115 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1617 - - gmx:100791805 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4548 05 118040348 118047143 Amo15g1617 15 114010865 114013806 hybridization