Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1583 CGCCGGTCACCGCTGCTTCCGATCGATTTTTCTATCTTCTTGGTCCACTTGGCAACTATTCCTATCACTGGAACTGGGATTAACCCAGCTAGGAGCCTTGTTAATTTTTTGGGTTGGGCCTTTCATTGGAGTTGCTCTTGCTGCCGTGTACCACTAGATAGTCATCCGATTTTGCTTTTGATTATGCTTCTAATTACATTGGGTCTTTCTTTGTGTTTATGCTTCTGTTCGATATCTTTTTTATGTTTTTGCTTCTGTTTATGTTTCTGTTTCACTCTGATTCTGATTCTGTTTATACTTCTGATTACATTAATTTTGTTTCTAATTTTATTATTGTTCCTGCTAGTGTTGTTGTTCTTGTTCTTCTTCTGCTTCTAG 378 0.3783 RRSPLLPIDFSIFLVHLATIPITGTGINPARSLVNFLGWAFHWSCSCCRVPLDSHPILLLIMLLITLGLSLCLCFCSISFLCFCFCLCFCFTLILILFILLITLILFLILLLFLLVLLFLFFFCF* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1583 125 Pfam Major intrinsic protein 6 35 IPR000425 GO:0015267|GO:0016020|GO:0055085
Amo15g1583 125 Gene3D Glycerol uptake facilitator protein. 2 52 IPR023271 -
Amo15g1583 125 SUPERFAMILY Aquaporin-like 6 43 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1583 Amo-Chr15 113195946 113196442 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1583 6 74 Major Intrinsic Protein MIP AT2G45960 47.727 1.33e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1583 K09872 - gmx:100775766 59.6918