Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1572 ATGGGAGAGAGTGGCATTAGGCAAAGCGATAATTTACCAGTGCGACCTCGCTGCCGCTTCTGCCCCCTTGGCTTCTACACTGCAACCATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAGCACCCTGAGATTGATGTCCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTCAGAGAGACATTTGCCTGGATGCACTATTACTGGTTCCTCACCAACGATGGCATCGAGCATCTCAGGACATACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAGCAAGCCAAGCCACCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGAGGGAGAGCGCAGATTCGGTGACCGTGATGGATACCGCGGAGGTCCACGAGGACCTGGCGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGTGGTTTTGGAGGCGGTGCTCCAACAAGCTCAAACGCTCCTTAA 633 0.5529 MGESGIRQSDNLPVRPRCRFCPLGFYTATMIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPPGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGGAPTSSNAP* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1572 210 MobiDBLite consensus disorder prediction 119 210 - -
Amo15g1572 210 MobiDBLite consensus disorder prediction 141 157 - -
Amo15g1572 210 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 18 210 - -
Amo15g1572 210 Pfam Plectin/S10 domain 32 123 IPR005326 -
Amo15g1572 210 Gene3D - 30 133 IPR036388 -
Amo15g1572 210 PANTHER 40S RIBOSOMAL PROTEIN S10 18 210 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1572 Amo-Chr15 112907763 112909298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1572 30 183 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 5.21e-75 222