Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1539 AGTTTTACAGAGGAAGAAGATGTAAATGTAGATGATGTAACTGCTGCTTTTGATGATTCTAAGGAAAATCTAGTGACAGAGAGAAAAGAGAAACCGGAAGTTGTAAAGAGAGAAACACATTTTACTTCACAACATCCTCCGAACGAAATCATGTCGAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTCAATGTTCGCAATAATTCAATAATCCAGATTTGTTCTGGTTTTGGGTTCCATAATGCTGGGCTTGTCCGGTCTCCAATTTCACCAACCTTGCCACAGATAGGTTCTAGGTTGTGCCTGACTTGGGGCATCTTATGGAGTTTCCCTGAGACCCGGAATCATGTGCTTGTTACCTCCCTACTAATGAGCTGGTCCATCACTCAGCAAGCCTTTAGGTTTGGCGCTCCATCTATTGCTTCGGATAATTCACTATTCTTTCTTTGGCTTCAAGGAGGCTTTCCCATCATGGCTTTTGTGGCTAAGGCGATTCTTGCATGCGCAATTGCTGCCAAGGACTATGACAAGCTCGAGTATTACAGGATTTCCTTTTAG 558 0.4301 SFTEEEDVNVDDVTAAFDDSKENLVTERKEKPEVVKRETHFTSQHPPNEIMSKIEEAAKPLGFNVRNNSIIQICSGFGFHNAGLVRSPISPTLPQIGSRLCLTWGILWSFPETRNHVLVTSLLMSWSITQQAFRFGAPSIASDNSLFFLWLQGGFPIMAFVAKAILACAIAAKDYDKLEYYRISF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1539 185 Pfam Protein tyrosine phosphatase-like protein, PTPLA 81 130 IPR007482 -
Amo15g1539 185 Pfam NAF domain 36 66 IPR004041 GO:0007165
Amo15g1539 185 Gene3D Kinase associated domain 1, KA1 12 78 - -
Amo15g1539 185 PANTHER PTPLA DOMAIN PROTEIN 82 136 IPR007482 -
Amo15g1539 185 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 82 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1539 Amo-Chr15 112025682 112027720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1539 4 69 CBL-interacting serine-threonine protein kinases AT1G01140 47.253 2.31e-18 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1539 K10703 - gmx:100794136 95.1301