Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1537 ATGAGGGATTCAAATGTTCACCATGGCAGCACTTTCACCTTCACCTTCTCCTTCTTCTCCTTCAACATGCCCCCATCGACTTCAGCTATGTTAAGAGAGTTCCATGGAACCCTTCAACATGGTTCGCGCAGTACCTTAAAGCAACTACAAATTTCAACCTCCCAAACCTTGAAACCTCAACCTCATGCGTCCATGATTTCTAGTCTCAGCTCAATTCCTTGTCTCTCCAAAACAACCTCATTGACTTGTGCTTTAACCTTCACCAATTGGGACAAGAAGCTTGGTCAAATCACGCCTCTTGATACTAGTTGCAAACAAGACCTCACTGATCTTTCGCTATGTGATTTGTGTCTTACTGCAGGGTTTCAGGTGCAGCATAAACTTGTCTCCGTTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTACGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGGTGGTTCTGGTGGAAAAAGTCACCAGGATTTGGTTTTTGGGAGTATGTTTGGTATGATAGGAAGGTTAGGAGGAAGAAGCTTAATGATGATGCAATTCTCAACCAAGAATTTCATTGGCAAGGGTGGATTTGGGCTTGTTTTCAATGGGGTTTTGTCCGATGGTTCAGTCGTGGCGGTTAAGAGGATCTTGGAATCTAATTTTCAAGGGGATGTGGAGTTTTGTAATGAGGTGGAGATTATTAGCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGATGATGATGATGAAAAATTTAATGACAGGGGAAGTCAGAGGTTTTTGGTTTATGATTACATGCCGAATGGAAACCTTGAAGACCATCTGTTTTTGGTGAGTGAGCAGCAAAAGTTGAAGAAATCGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATATGGCAAAGGGGCTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGTGATGTATTTATCGTTTAA 1050 0.4295 MRDSNVHHGSTFTFTFSFFSFNMPPSTSAMLREFHGTLQHGSRSTLKQLQISTSQTLKPQPHASMISSLSSIPCLSKTTSLTCALTFTNWDKKLGQITPLDTSCKQDLTDLSLCDLCLTAGFQVQHKLVSVDGNASHSENCFKFTILYAATFVNQYGPESNGAMSCIFGMSLYPQGGGSGGKSHQDLVFGSMFGMIGRLGGRSLMMMQFSTKNFIGKGGFGLVFNGVLSDGSVVAVKRILESNFQGDVEFCNEVEIISNLKHRNLVPLRGCCVVDDDDEKFNDRGSQRFLVYDYMPNGNLEDHLFLVSEQQKLKKSLTWPQRKSIILDMAKGLAYLSCDACVHGDVFIV* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1537 349 SUPERFAMILY Protein kinase-like (PK-like) 207 346 IPR011009 -
Amo15g1537 349 Pfam SPARK 63 142 IPR043891 -
Amo15g1537 349 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 67 194 - -
Amo15g1537 349 Gene3D Phosphorylase Kinase; domain 1 204 294 - -
Amo15g1537 349 ProSiteProfiles Protein kinase domain profile. 209 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1537 349 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 208 338 - -
Amo15g1537 349 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 67 194 - -
Amo15g1537 349 SMART tyrkin_6 209 348 IPR020635 GO:0004713|GO:0006468
Amo15g1537 349 Gene3D Transferase(Phosphotransferase) domain 1 295 346 - -
Amo15g1537 349 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 208 338 - -
Amo15g1537 349 ProSitePatterns Protein kinases ATP-binding region signature. 215 237 IPR017441 GO:0005524
Amo15g1537 349 Pfam Protein tyrosine and serine/threonine kinase 212 346 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1537 Amo-Chr15 111997327 111998546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1537 82 336 Receptor kinase-like Gene Family AT1G11050 47.667 1.81e-83 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Amo15g1537 PK_Tyr_Ser-Thr 6.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1537 - - aip:107640759 369.392