Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1531 ATGCCCCTTCGCCCTCCATCGTCGAGCCCCGTCCATCCGCCGTCGTCCAGCGCCTCTCCCTTTCTGGCAGCCACCGCGTCTTCCTCGACTCCTCCCTGCACTCTGCCACTCTCTGTCTGCATCATCAAGAATGGAGCCTCTGACTCAGATTGTGAGAAGGGAAAGCTACTAGATTGGCCAAAGCGTTTTCGTATCATCAATGGGATTGCCAAAGGTCTTCTTTATCTTCATCAAGATTCAAGAAATAGAATAGTTCATAGAGATCTCAAGGCTAGGAATGTTTTGTTAGATGATGAATTGGATCCTAAAATCTCGGACTTTGGAACAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTACGGCTATCTATCACCAGAGTACATAGTTGGTGGGCTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATATTTAGTGGGAAGCGAAATAAAGGATTCATCGATATTGACCATTACTTTAATCTTCTTGCCGATGCATGGACATATTTAGCCAAAGACAAGTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGCCAGAAGTCATAAGAACAATTCATGTCGGTTTACTATGTGTGCAACAAAATCCAGAAGATCGACCAAGCATGTTATATGTGCTTATGATGCTGAGTAGTGAATGGGAACTACCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGATTGGTGACCATTCTACATTAAGCAACAATGAACTCACGGTTACTCAGGTCCATGCGCGTTAG 825 0.4267 MPLRPPSSSPVHPPSSSASPFLAATASSSTPPCTLPLSVCIIKNGASDSDCEKGKLLDWPKRFRIINGIAKGLLYLHQDSRNRIVHRDLKARNVLLDDELDPKISDFGTARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIFSGKRNKGFIDIDHYFNLLADAWTYLAKDKCLEIVDASIRDSINLPEVIRTIHVGLLCVQQNPEDRPSMLYVLMMLSSEWELPQPKKPGFFIERDVIGDHSTLSNNELTVTQVHAR* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1531 274 SMART serkin_6 16 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1531 274 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 53 258 - -
Amo15g1531 274 Pfam Protein tyrosine and serine/threonine kinase 56 231 IPR001245 GO:0004672|GO:0006468
Amo15g1531 274 MobiDBLite consensus disorder prediction 1 23 - -
Amo15g1531 274 Gene3D Transferase(Phosphotransferase) domain 1 47 243 - -
Amo15g1531 274 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1531 274 Pfam Domain of unknown function (DUF3403) 235 274 IPR021820 GO:0004674
Amo15g1531 274 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 53 258 - -
Amo15g1531 274 SUPERFAMILY Protein kinase-like (PK-like) 53 234 IPR011009 -
Amo15g1531 274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1531 Amo-Chr15 111795367 111797517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1531 57 251 Receptor kinase-like Gene Family AT4G23290 56.345 7.69e-71 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo15g1531 PK_Tyr_Ser-Thr 9.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1531 - - aip:110267275 453.751