Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1517 ATGGATTCTTCAACCCTAAATTACCAAAATGCCACTGTAGCATCTGGAATTGCATCTGCAATAGCCATCTTACTCTGTTTCTTTCTGTTTCGTTTCATCATCAAATTCGGTCATCATAGTAGAGAACCCCCAACAGTGTCCGGAGCATGGCCAATCATCGGTCACCTTCCATTGTTACGCGGTTCAAAGCAGCTCCACATAACTCTAGCTTCCATGGCCGACAAGTACGGACCCCTTTTCACCATCAAGAGTGGCTCCAAAAAGACCATAGTACTCAGCAACTGGGAAATGGCGAAAGAATGCTTCACCACCAACGACATGGCGGTTTCCACTCGCCCCACAAAGCTTGTCGCCAATGAAAACCTTTCATACAACGGAGCCATGTTTGGTTTCGCGCCGTACGGTCCATACTGGCGCCAAATCCGCAAGATTGTGACGTTAGAGCTCCTCTCGAATCGCCGAATCGAGCAACTAAGCCATATTCGTGTCTCTGAAGTTCAAGCTTCAGTGAAAGATGTATACAGAAAAAGAAATAATGACGAAGAGTATGTGTTGGTGGAGATGAAGCAGTGGTTTGCTGAATTGATCTTCAACATGGTTTTTAGGATGCTTGTTGGGAAGAGATGCTTTGGATTTGGTGGTTTGGAAAATAATAACAGGTGTTTGGAAACGATAAGGGAGTTCATGAATTTGTTGGGGGTGTTTACAGTGGGAGATGTTGTTCCTTTGTTAAGGTGGTTGGATTTTGGGGGCTATGAGAAAGCAATGAAGAAAACTGCTAAGGAATTGGATGAGGTTTTGGATGATTTTGTAAGAGAACATCGCCAAAAGAGGAGTTTGTTAGATGAGAAAGATTTTTTGGATGTCATGATTTCGGTTTTTGATGATGCCTCAGGTGTTGATGGATTTGATGCTCATACCATAATCAAAGCCACAACATTGACTATGATTACTGGCGCAACCGATACAACGACTGTTACCCTTACATGGGCAATGTGTATGCTATTGAGAAATCCCCACACATTAAAAAAAGCAAAAGAAGAACTCAATACCCAAATTGGGAAAGAGAGACGCATACTTGAGTCTGATCTAAGCAAATTGCAATACCTTCAAGCCATTATTAAGGAGACACTAAGATTGTATCCACCTTCTCCACTTGGAGTGCACCGTGAATTCACAGAAAATTGCAATTTAGGTGGATACCAAATTAAAAAAGGAACTCGATTAATTACAAATATTTGGAAAATCCACACCGACTCTTCTATTTGGTCAGATCCATTAGAGTTCAAGCCAGAAAGGTTCCTGACAACTCATAAAGATGTGGATGTTAAGGGTCATCATTTTGAGTTGTTACCATTTGGAAGTGGTAGAAGGGCGTGTCCAGCAATATCTTTTGGCTTTCAAATGGTTCATTTTATTCTGGCTAGCTTTTTGCATTCCTTTGAGATCTTGAATCCTTCCCCTGAACTTGTTGACATAGATGGAACCCTTGGAATCACCCATGTCAAAACTACTCCGCTTGAGATTCTTGTTAAACCGTGTTTGATTCCCAATTGTTATGAGACCATGTAA 1572 0.416 MDSSTLNYQNATVASGIASAIAILLCFFLFRFIIKFGHHSREPPTVSGAWPIIGHLPLLRGSKQLHITLASMADKYGPLFTIKSGSKKTIVLSNWEMAKECFTTNDMAVSTRPTKLVANENLSYNGAMFGFAPYGPYWRQIRKIVTLELLSNRRIEQLSHIRVSEVQASVKDVYRKRNNDEEYVLVEMKQWFAELIFNMVFRMLVGKRCFGFGGLENNNRCLETIREFMNLLGVFTVGDVVPLLRWLDFGGYEKAMKKTAKELDEVLDDFVREHRQKRSLLDEKDFLDVMISVFDDASGVDGFDAHTIIKATTLTMITGATDTTTVTLTWAMCMLLRNPHTLKKAKEELNTQIGKERRILESDLSKLQYLQAIIKETLRLYPPSPLGVHREFTENCNLGGYQIKKGTRLITNIWKIHTDSSIWSDPLEFKPERFLTTHKDVDVKGHHFELLPFGSGRRACPAISFGFQMVHFILASFLHSFEILNPSPELVDIDGTLGITHVKTTPLEILVKPCLIPNCYETM* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1517 523 SUPERFAMILY Cytochrome P450 44 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Amo15g1517 523 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 Pfam Cytochrome P450 47 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PANTHER CYTOCHROME P450 82A2 1 521 - -
Amo15g1517 523 Gene3D Cytochrome P450 35 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo15g1517 523 PANTHER CYTOCHROME P450 82C3-RELATED 1 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1517 Amo-Chr15 111390378 111392827 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1517 21 520 Cytochrome P450 AT4G31970 44.747 1.98e-160 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1517 - - aip:107643961 662.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4597 05 118684145 118687234 Amo15g1517 15 111390378 111392827 hybridization