Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1509 ATGTATTATTGTATTCGCAATGTTATTAAAGGAGCATTAGAAGAAGGATTTGTAGGATATATAACAGCACAAGGAAGAACAAATACAACTTATTTAAATAGGTTTGTATCCAAGAATTGCAATGTCTTTAAAGATGGCACTGTTTTCTTGGAAAGGCCTTGGAGACCTTTTGCTAGGGTTCTTTTCTTCAACACAAGCATGTCTAATATTGAATAA 216 0.3241 MYYCIRNVIKGALEEGFVGYITAQGRTNTTYLNRFVSKNCNVFKDGTVFLERPWRPFARVLFFNTSMSNIE* 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1509 71 PANTHER PECTINESTERASE 10-RELATED 4 70 - -
Amo15g1509 71 Gene3D - 4 70 IPR012334 -
Amo15g1509 71 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 4 70 - -
Amo15g1509 71 SUPERFAMILY Pectin lyase-like 16 70 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1509 Amo-Chr15 111015888 111016711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1509 19 70 Carbohydrate Esterase AT1G05310 38.462 1.96e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1509 - - adu:107471663 97.4413