Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1491 ATGGGAACTGCAGAAGAAAGAGCCATTGCTGTTATCATGGTTGGAGGCCCCACCAAAGGTACTAGATTCAGGCCATTGTCATTCGACATACCTAAGCCACTTTTTCCATTGGCGGGACAACCCATGGTCCATCACCCAATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTAATTGGTTTCCATGAGGAACGCGAATTTGCATTATTTGTTTCCTCCGTCTCAAACGAGCTTAAAGTCCCTATTAAATATCTGAAAGAAGACAAGCCTCACGGGTCAGCTGGTGGTCTTTATAGCTTTAGAGATCAAATCATGGAGGATGATCCGTCACATATTTTTTTGCTAAACTGTGATGTTTGCTGCAGCTTTCCACTACCGGAAATGCTCGATGCTCATAGAAAATATGGTGGGATGGGAACAATATTAGTTGTTAAGGTTTCGCCAGAGTCGGCCAGTGAATTTGGGGAATTGGTGGCTGATCCAGTAACCAATGAACTGTTGCATTACATTGAGAAACCTGAAACTTTTGTAAGTGATCTAATAAACTGTGGTGTGTATATATTTACACCAGATATATTTACTGCAATTGAGGGTGTTACTACTCAGCAGAAAAATAGAGCTAATCTAAGACGTGTCTCCAGCTTTGAAGCAATGCAGCCAGACACAAGGAATCTTTCTTCCGATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCGGGGAAGAAACAGTTATACATTTATGAAACCAAAGACTTCTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCTGCCTTGTATCTTTCCCAATTTCGTCACATCTCGCCACAACTATTGGCAAATGGAGATGGTAATAAGAAAGCCAGCATCAGTGGTGATGTTTATATTCACCCATCTGCTAAAGTGCATCCAACAGCAAAGATTGGCCCTGGTGTATCAATATCTGCAAATGCTCGTATCGGAGCTGGTGCAAGGCTCATAAATTGTATCATCCTAGATGATGCAGAAATTAAGGAGAATGCTGTTGTCATTCATGCAATTGTCGGATGGAAATCTTCTATTGGACGCTGGGCCCGTATCCAGGCTAGCGGAGATTACAATGCAAAACTTGGGGTTACTTTGCTTGGAGAATCTGTGATAGTAGAGGATGAGGTTGTGGTTGTTAATAGCATTGTCCTTCCACACAAAACCTTAAATGTGAGAGTTCAAGATGAGATTCTTTTGTAA 1248 0.4127 MGTAEERAIAVIMVGGPTKGTRFRPLSFDIPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFHEEREFALFVSSVSNELKVPIKYLKEDKPHGSAGGLYSFRDQIMEDDPSHIFLLNCDVCCSFPLPEMLDAHRKYGGMGTILVVKVSPESASEFGELVADPVTNELLHYIEKPETFVSDLINCGVYIFTPDIFTAIEGVTTQQKNRANLRRVSSFEAMQPDTRNLSSDYVRLDQDILSPLAGKKQLYIYETKDFWEQIKTPGMSIKCSALYLSQFRHISPQLLANGDGNKKASISGDVYIHPSAKVHPTAKIGPGVSISANARIGAGARLINCIILDDAEIKENAVVIHAIVGWKSSIGRWARIQASGDYNAKLGVTLLGESVIVEDEVVVVNSIVLPHKTLNVRVQDEILL* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1491 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Amo15g1491 415 Pfam Nucleotidyl transferase 10 212 IPR005835 GO:0009058|GO:0016779
Amo15g1491 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 415 - -
Amo15g1491 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Amo15g1491 415 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 415 - -
Amo15g1491 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 277 IPR029044 -
Amo15g1491 415 Gene3D Hexapeptide repeat proteins 284 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1491 Amo-Chr15 110375809 110398238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1491 K00966 - gmx:100780801 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4603 05 118821110 118827654 Amo15g1491 15 110375809 110398238 hybridization