Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1487 ATGGCAGCTGCCGCCGATCTTTTCATTCAGCGACTGCCTGAAGTGTCCGCGCGTGAGCTTCACGTCCTTGCCGTTGATGACAGCCATGTTGATCGCAAGGTCATTGAACGGTTGCTCAAAATCTCTTCATGCAAAGTGACAGTTGTGGACAGTGGAACTAGAGCTTTACAGTATCTAGGGTTGGATGAAGGAGAGAAAAATAGTTCAATTGATTTTGATGGCATGAAGGTTAATCTGATAATGACTGACTATTCGATGCCGGGAATGACAGGATTTGAACTCCTAAAGAAGATCAAGGAATCGTCGATATTTAGAGAGATTCCGGTGGTGGTGATGTCTTCTGAGAATATCTTGACCCGAATTGATAGTTGCTTGGAAGAAGGAGCAGAGGAGTTTCTGTTGAAACCTGTTAAGTTGTCCGACGTAAAACGTGTGACGGATTTCATCATGAGAGGTGAAGGGATGAAAGGAGGCAAAAGATCTCAAAAACGAAGGCGTTCGGACGATTGCGTTCCATCTCTAACAACTGAACTTTCACCATTGTCTCCATCCACCTTGGCCTCAAAGAAATCTAAACTATGA 582 0.4433 MAAAADLFIQRLPEVSARELHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDEGEKNSSIDFDGMKVNLIMTDYSMPGMTGFELLKKIKESSIFREIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRVTDFIMRGEGMKGGKRSQKRRRSDDCVPSLTTELSPLSPSTLASKKSKL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1487 193 PANTHER TWO-COMPONENT RESPONSE REGULATOR 13 180 IPR045279 GO:0009736
Amo15g1487 193 ProSiteProfiles Response regulatory domain profile. 21 150 IPR001789 GO:0000160
Amo15g1487 193 MobiDBLite consensus disorder prediction 172 193 - -
Amo15g1487 193 SMART REC_2 20 146 IPR001789 GO:0000160
Amo15g1487 193 Coils Coil 187 193 - -
Amo15g1487 193 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR6 13 180 - -
Amo15g1487 193 Gene3D - 20 191 - -
Amo15g1487 193 MobiDBLite consensus disorder prediction 153 193 - -
Amo15g1487 193 MobiDBLite consensus disorder prediction 153 171 - -
Amo15g1487 193 CDD REC_typeA_ARR 22 145 - -
Amo15g1487 193 Pfam Response regulator receiver domain 22 143 IPR001789 GO:0000160
Amo15g1487 193 SUPERFAMILY CheY-like 19 151 IPR011006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1487 Amo-Chr15 110151873 110153999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1487 20 178 Response Regulator Gene Family AT5G62920 71.698 2.14e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo15g1487 Response_reg 1.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1487 K14492 - gmx:100819165 266.159