Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1442 ATGGCGGAGTGGTTGTTAAATCGGTGGACCGGCGCAGCCGCAGCTATAATGATCCAGTGGAGCTGCGGTGCATCGTACACCTTCAGCATCTACTCCCCAGTGCTCAAGTCCTCGCAAGGCTACGACCAATCCACGCTTGATACCGTTTCGGTGTTCAAGGACATCGGCGCCAACTTCGGCATCCTCTCCGGCCTCCTTTACACCGCCGTCACTCCCTACCGGAGCGGTGGCGTGGAGTGCTTGTCGGCAAAGTCGAAGTGGGCCTCATTGGGTGGTCCCTGGGTGGTGCTGGCGGCCGGGGCGGTCCAGGTGTTCGTGGGGTTCATGTTCATGTGGGCCGCTGTTGTTGGGCTCATTGGGACGCCGCCGGTTTGGGTTATGTGCTTCTTTGCGTGGCTTGGAGCTAACGGCCAGACGTTCTTGAATACCACTAATGTTGTCACTGGCTTGCGTAATTTCCCTGAATATAGTGGTACCATTGTGGGCATCATGAAGGGCTTCCTTGGACTCAGTGGAGCAATCCTAATTCAGCTGTATCACACATTTTGTGATGGCGACCCGGCCACATACCTTCTGATGCTTGCTTGCTTGCCTGCATTCATATGTACACTGCTAATGTTTTTGGTGAGGATCTATGAAGTGCGCGACAGCAATTACAAGAAGCATTTGAACGGTTTCTCAGTTGTCACTGTGATTATTGTTGCCTATCTCATGTTCATAATTATTTTACAAAACTTCACCAGCTTATCAACTTGGGCGCGCATGTTAACATTTGTAATCCTAATGGTTCTACTAGCACTCCCCTACGGCATTGCCATCAAAGCTCAATGGGAGGAGTCACGAAGCTTCGCGCAAACCTTCTCGTTTGAGAGGCCCCCTTCAACGGACAGCCAAAAGCTAATCATGTCGCCTAGTTATTCTCCATCAGGGGATCAATCGGAATACCAAGAGCTGCCTAGTGATGCAGGGCAGCTACAATTGAATTCGGATGACATGTTGACCCATGAACAAGAAATGAACCTCTTGCAAGCTATGTGCACGATTGATTTTTGGATGTTGTTTTTAACCATGATATCAGGGTTAGGCTCAGGGCTTGCAATGATAAATAACATGAGCCAAATAGGCGAATCTCTTGGCTATAGTACAATTGAGATTAATAATATGGTGTCCTTGTGGAGTATGTGGAACTTTCTTGGCCGTTTTGGAGGTGGTTATGTATCTGATTATATCATGCATCGAAAAGGTTGGCCGAGGCCCTTGTTGATGGCAGCAACTCTGGGGACGATGATTTTCGGCCATGTCATTATAGCTGTTGGTTTCCCTGGAAACCTGTATTTGGGTCCTGTCTTGGTGGGAATCTGCTATGGTGCACATTGGTCCTTGATGCCTACTATCACTTCTGAGATTTTCGGTGTAAGGCATATGGGTACCATTTTCAACACTATTGCTGCTGCAAGTCCGCTTGGATCTTATTTACTTTCTGTCAAAGTTGTCGGATATATTTACGACAAGGAAGCCGATAAAGAAGATAACTCATGCTTTGGAATACATTGCTTCATGTCATCGTTTTTTATCCTGGCAGCTGTATCTTTTATCGCATTTTTGGCTGGTCTTGCATTATACTTCCGGACACGAAATTTCTATAAGCTAGTTGTGCTCAGAAGATTAAAACATTCTGTGTGA 1683 0.4718 MAEWLLNRWTGAAAAIMIQWSCGASYTFSIYSPVLKSSQGYDQSTLDTVSVFKDIGANFGILSGLLYTAVTPYRSGGVECLSAKSKWASLGGPWVVLAAGAVQVFVGFMFMWAAVVGLIGTPPVWVMCFFAWLGANGQTFLNTTNVVTGLRNFPEYSGTIVGIMKGFLGLSGAILIQLYHTFCDGDPATYLLMLACLPAFICTLLMFLVRIYEVRDSNYKKHLNGFSVVTVIIVAYLMFIIILQNFTSLSTWARMLTFVILMVLLALPYGIAIKAQWEESRSFAQTFSFERPPSTDSQKLIMSPSYSPSGDQSEYQELPSDAGQLQLNSDDMLTHEQEMNLLQAMCTIDFWMLFLTMISGLGSGLAMINNMSQIGESLGYSTIEINNMVSLWSMWNFLGRFGGGYVSDYIMHRKGWPRPLLMAATLGTMIFGHVIIAVGFPGNLYLGPVLVGICYGAHWSLMPTITSEIFGVRHMGTIFNTIAAASPLGSYLLSVKVVGYIYDKEADKEDNSCFGIHCFMSSFFILAAVSFIAFLAGLALYFRTRNFYKLVVLRRLKHSV* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1442 560 CDD MFS_Mch1p_like 8 533 - -
Amo15g1442 560 Pfam Major Facilitator Superfamily 353 545 IPR011701 GO:0022857|GO:0055085
Amo15g1442 560 Gene3D MFS general substrate transporter like domains 342 549 IPR036259 -
Amo15g1442 560 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 559 - -
Amo15g1442 560 ProSiteProfiles Major facilitator superfamily (MFS) profile. 348 560 IPR020846 GO:0022857
Amo15g1442 560 PANTHER F25A4.25 PROTEIN 6 559 - -
Amo15g1442 560 MobiDBLite consensus disorder prediction 289 314 - -
Amo15g1442 560 SUPERFAMILY MFS general substrate transporter 5 211 IPR036259 -
Amo15g1442 560 Pfam Nodulin-like 93 272 IPR010658 -
Amo15g1442 560 Pfam Nodulin-like 8 70 IPR010658 -
Amo15g1442 560 SUPERFAMILY MFS general substrate transporter 232 546 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1442 Amo-Chr15 108465472 108470105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1442 3 558 Nodulin-like Gene Family AT1G74780 56.835 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1442 - - adu:107491342 1124.77