Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1441 ATGGGACTGGAAGAACTCCCAAATTGCACACAAGCTTGTGATACTTCTTCGCAGATGTCTTGCATGAGTGATGGATATAACCAACACCAAAGTCTAGTTTCCCCCATAACAAGAAACCAGTGCTTGGGGAATTCTAGAAGGGACAATGCCTTAATCGAAAATTCACGATTTTCACTTAAACCAATCCCATGGAGGCAACCTGATGCAAGCCAAGATCCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTTGACAACAGCTTCAAAATCCTTCCACTCTGTATATGGCGAAATTGAGAAAAGGATTGCAGATCTTCAATTTAAAAATTCAGGAAAGGACCTCAGAGCCCTTAAGCAGATTCTAGAAGCAATGCAGAGATACAAAGATTCACTAGATATTACAAGAGACCAGGAAATAAATTACCCTTCTGACAGAGGTCTGAGTGAAAGCTCGGAACTACAGACCCCAAGACAACAGACCAACCCAACATTTGTCACTGATGATATTTCAAGTTCACCCCAGGGTAGAAAGTTTCCAATTATCATCATGAAGCTAGCACAAATCTCAAGGAAATCCAATGTCGCTACCAAAGAAATGACTAATGGCAAATCAGGCCGCATCAAGTTTTCTACCAATGATCCCAAAGATGGAAGATTGCTTGACAATATTGAAAGTCAAATAGCAAAAGGAACCAGTTCAACAAATCCTTTTAGTCAACGCTTCCATTCTGCAGATAAGAGTAACATGAAGAAAACTTCAAAATTAATGCAAGCCTCAAAAGTCCCTCAGGTCATCAATGGAGAGGACACCAATAACTCCAGCCATACAGCAGAAACTAGAAGCCCAAGAGTACAAAATAAGTTTGGTTTTGAAAAGTGTTCACCTACAAACCAATCATCAGAGTCCAAAAGTAAAAGAAGACAACACAAGCAATCATCAGAGTCATTGTCCCTAAGTTCCACCCCTAAGCAAAAAGTTTGTACCTTGCAGCAAAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAAGAGGAACTTTAAGCATCAAGTTGATGTTATTTCCTCCAATGTTGACAGCAACAGAAGCATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACATCATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGTTACTTCAGAACAACAAAGTCCAGTTTCTGTTCTTGATCTACAATTTTACAGTGAAGACCCACCTTCTCCAATTAAAAAGAAGACAGAAACCTCAAAAGATTTAGGTATATTCTACACTTAA 1353 0.3984 MGLEELPNCTQACDTSSQMSCMSDGYNQHQSLVSPITRNQCLGNSRRDNALIENSRFSLKPIPWRQPDASQDPDLQVSKGSETLTTASKSFHSVYGEIEKRIADLQFKNSGKDLRALKQILEAMQRYKDSLDITRDQEINYPSDRGLSESSELQTPRQQTNPTFVTDDISSSPQGRKFPIIIMKLAQISRKSNVATKEMTNGKSGRIKFSTNDPKDGRLLDNIESQIAKGTSSTNPFSQRFHSADKSNMKKTSKLMQASKVPQVINGEDTNNSSHTAETRSPRVQNKFGFEKCSPTNQSSESKSKRRQHKQSSESLSLSSTPKQKVCTLQQRNEGFSKIRCQKRNFKHQVDVISSNVDSNRSMDSHRDIEGTQADHSESNNIISIQQVTHMNQNTATKELSKESAMAMITVTSEQQSPVSVLDLQFYSEDPPSPIKKKTETSKDLGIFYT* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1441 450 MobiDBLite consensus disorder prediction 62 83 - -
Amo15g1441 450 PANTHER LONGIFOLIA PROTEIN 1 445 IPR033334 GO:0051513
Amo15g1441 450 MobiDBLite consensus disorder prediction 225 243 - -
Amo15g1441 450 MobiDBLite consensus disorder prediction 250 283 - -
Amo15g1441 450 Coils Coil 117 137 - -
Amo15g1441 450 MobiDBLite consensus disorder prediction 141 172 - -
Amo15g1441 450 MobiDBLite consensus disorder prediction 196 325 - -
Amo15g1441 450 PANTHER LONGIFOLIA PROTEIN 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1441 Amo-Chr15 108434020 108435451 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1441 52 446 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 29.567 1.34e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1441 - - aip:107640944 865.529