Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1438 ATGATGGATTGGAGGAAGTTGAGCTCATACGCGAAATCGAAGTGGATATCCACGGTGGCGAGCACATGGATTCAATGCAGCAGCGGATCACTCTACACTTTCTCAATCTATTCCCAAACCCTAAAGTCAACGCTGCACTACGATCAGTCAACTCTCACCACTGTGTCCGTCTGGAAGGACGTAGGGATCAACGCCGGTGTCCTTTGCGGCCTTCTCTACGACTTCGCTGCGCGCCGAACAGCTAACGGGCCCTGGCTGATCCACTTATTGGGCTCGGCCCAATGCTTCTTGGGCTATTTCCTCATGTGGGCAGCGGTTGCGGGCGTTATCGCTCCGGTGCCCGTGCCTATCATGTGCCTATTCATGTACGTGACAGCCCAGGCTCAGGGCTACTTCAACACTTCCAATGTTGTCACCGGCGTCCACAACTTCCCTGACTATAGGGGAACCATTGTGGGCATCATGAAGGGATTTCTTGGTCTCAGTGGAGCAATACTAATTCAAGTGTATAGGACAATATTCAACAAGAAGCCTAAAGCATATCTTCTGATGCTAGCTCTCTTGCCGCCGATAAATACTTTGCTGCTTATGTGGTTTGTAAGAATCCACAACACCCGAGAGGGCGACGAAAGGAAATATCTAAACATGTTTTCTTCCATGGCTGTGGTTGTCGCTGCATATCTAATGACTGTTATAATCCTGGAGAACATCCTTAGAGTGCCATTAATTATCCACGTGCTCATGCTGATTTTGCTCATTGTGTTGCTAGCCTCACTTCTTTGTATCGCAATTCAAGCACATGAGGCGACCCTTGCCAATACCTCGGAAAATTTTCATGATGAGAGAACCCAACTAATTGTGGAGCAAGTGTCCTCAGAATCAGATACTAACAAACAGAGGACTCTGCAACTGGGAGGAAACTTGAACCTTTTGCAAGCAGCACAAACTCTCAACTTTTGGATTTTGTTTTTGTCTGTGGCATGTGCCATGGGATCAGGACTTGCAACTATTAATAATATCAGCCAGATAGGGGAATCCCTTGGTTACACCGTGCGCGAGACAGATTCCTTGGTTTCATTGTGGAGCATTTGGAACTTCGCTGGGCGTTTCGGAGGTGGTTATATCTCGGATCATTTCTTACACACAAGAGGATGGGCAAGACCTTTGTTTATGGTCATCACCTTAATGGTCATGAGCATTGGCCATTTGATTATTGCTTCTGGAATGCAGGGTGCTCTATATGTTGGTTCAGTTTTGGTGGGTATCTGTTATGGCTCTCAGTGGTCAATAATGCCCACAATCGCTTCTGAGATATTTGGTGTGGGAAATATGGGTAGCATATTCAACACCATTACAATAGCAAGTCCTGTGGGATCTTACATATTTTCAATGAGAGTTGTTGGGTATATATATGACAAAGAAGCATCAGAGGGAAACACGTGCATTGGAACTCATTGTTTTATGTTGTCTTTCCTTATAATGGCATCTGCCACTGTTTTGGGTTCTCTGGCAGCTCTTGGTTTGTTTTTCCGGACAAGAAACTTCTATGGTCAGGTTGCACATAGTAGAATTCAGAACATCCTGTAA 1587 0.4568 MMDWRKLSSYAKSKWISTVASTWIQCSSGSLYTFSIYSQTLKSTLHYDQSTLTTVSVWKDVGINAGVLCGLLYDFAARRTANGPWLIHLLGSAQCFLGYFLMWAAVAGVIAPVPVPIMCLFMYVTAQAQGYFNTSNVVTGVHNFPDYRGTIVGIMKGFLGLSGAILIQVYRTIFNKKPKAYLLMLALLPPINTLLLMWFVRIHNTREGDERKYLNMFSSMAVVVAAYLMTVIILENILRVPLIIHVLMLILLIVLLASLLCIAIQAHEATLANTSENFHDERTQLIVEQVSSESDTNKQRTLQLGGNLNLLQAAQTLNFWILFLSVACAMGSGLATINNISQIGESLGYTVRETDSLVSLWSIWNFAGRFGGGYISDHFLHTRGWARPLFMVITLMVMSIGHLIIASGMQGALYVGSVLVGICYGSQWSIMPTIASEIFGVGNMGSIFNTITIASPVGSYIFSMRVVGYIYDKEASEGNTCIGTHCFMLSFLIMASATVLGSLAALGLFFRTRNFYGQVAHSRIQNIL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1438 528 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 11 526 - -
Amo15g1438 528 Gene3D MFS general substrate transporter like domains 2 201 IPR036259 -
Amo15g1438 528 CDD MFS_Mch1p_like 13 501 - -
Amo15g1438 528 Pfam Major Facilitator Superfamily 322 512 IPR011701 GO:0022857|GO:0055085
Amo15g1438 528 SUPERFAMILY MFS general substrate transporter 214 514 IPR036259 -
Amo15g1438 528 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 526 - -
Amo15g1438 528 Pfam Nodulin-like 14 264 IPR010658 -
Amo15g1438 528 SUPERFAMILY MFS general substrate transporter 10 203 IPR036259 -
Amo15g1438 528 Gene3D MFS general substrate transporter like domains 311 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1438 Amo-Chr15 108398114 108403745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1438 12 526 Nodulin-like Gene Family AT1G74780 55.075 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1438 - - gmx:100814668 763.451