Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1425 ATGGAAAGGGCTCTGGTAGCTTGGGTGATTTTGGTGATTTCCACCATTGTTTACTTCCATTCCTCTCTTGCTCTCTCACAAGATGGTGTCACATTGTTGGAAATCAAAAGCAGTTTGAATGACACAAGGAATTTTCTCAGTAACTGGCAACATTCTAATATCAAGTCCTATTGTAGATGGACTGGTATCACCTGTTATCCCGAGAAAGAACAGCGAGTTCGCTCAATAAATCTGCCTTACATGCAACTTGGTGGAATCATATCTCCCAGCATAGGCAAACTCAGTCGACTGCGGAGATTGGCACTTCATCAGAACGGTTTACATGATATTATTCCTAATGAGATTACCAATTGTACTGAGCTAAGAGCATTGTACTTGAGAGCCAATTATTTTCAAGGAGGAATCCCGCCAGATATTGGAAACCTATTGCATTTAAAAATATTGGATTTATCAAGCAACTCATTAAAGGGTGCAATACCTTCTTCTATTGGACAGCTCACACATTTGCAACTTTTGAACTTGTCGACGAATTTCTTTTCTGGTGAAATCCCTGACGAGGGAGTACTAGGAGCCTTTGGGAAAAACGTGTTTATTGGCAATTTAGATCTTTGTGGACGACAAGTTAAAAAACCATGTCACACAACACTTGGTTTCCCTGTGGTGCTACCACATGCTGAGAATGATGAATCGGAAGTAACTACCAAAAGAATATCACATTATGTGAAGTGGGTGTTAATCGGTGCAATATCAACAATGGGCATTGCACTTGCCTTAGTACTTCTGTTACTCTGGATTTGTTTGCCGTCGAAGAAGGAAAGAACTGCTAGGCAATACACAGAAGTGAACAAACAAGTCAATCCAGAATCAAGTACAAAGGGTGGTACAATACTAATTACTTTCCATGGTGATCTGCCATATCCATCATCTGAGATCATAGAGAAACTGGAGTCACTTGATGAAGAGGATGTGGTAGGGTCTGGAGGATTTGGTACTGTTTACCGCATGGTGATGAATGATTGTGGTACATTTGCTGTTAAGCGGCTTGATAGAGGTCGGGAAGGGTCAGATCAAGGATTTGAAAGGGAACTAGAAATCTTAGGTAGTATCAAGCACATCAATTTGGTAAACCTTCGTGGTTATTGCAGGCTTCCTTCTACAAAGCTCCTTATCTATGATTATTTGGCACTGGGAAGCTTGGATTGTCTCTTGCATGGAAACAGTGAGCATTTTATGAATTGGCACACTCGCCTAAAGATAGCCCTTGGTTCTGCCCGGGGTTTGGCTTACTTGCATCATGACTGCTCCCCCAAAATCGTGCATCGAGATGTTAAATCTAGCAACATCCTTCTTGATGAAAACATGGAGCCTCATGTCTCTGATTTTGGACTTGCAAAGCTTTTGGTTGATGATGACTCCCATGTTACTACAGTTGTTGCTGGCACATTCGGCTATTTGGCGCCAGAATATCTACAAAGTGGGAGAGCAACTGAGAAGTCAGATGTATATAGCTTTGGAGTTCTATTGCTAGAACTGGTAACTGGAAAGAGACCAACAGATCCTTCCTTCCTGAAGAGAGGGCAAAATGTTGTTGGTTGGATGAACACAGTCCAAAAAGAAAACAGATTCAAAGAAGTGTTAGACAAAAGATGCACCGATGCAGATTGGGAGTCTGTCGAAGTGATCATTGAACTGGCAGCAAGATGCACGGATGCAAATGCAGACGACCGTCCTTTGATGAACGAAGTGGTACAGTTGCTGGAGCAAGAGGTTATGTCTCCTTGTTCAAGTGATTTATATGAGTCACAAATAAATCATTATTGA 1821 0.4163 MERALVAWVILVISTIVYFHSSLALSQDGVTLLEIKSSLNDTRNFLSNWQHSNIKSYCRWTGITCYPEKEQRVRSINLPYMQLGGIISPSIGKLSRLRRLALHQNGLHDIIPNEITNCTELRALYLRANYFQGGIPPDIGNLLHLKILDLSSNSLKGAIPSSIGQLTHLQLLNLSTNFFSGEIPDEGVLGAFGKNVFIGNLDLCGRQVKKPCHTTLGFPVVLPHAENDESEVTTKRISHYVKWVLIGAISTMGIALALVLLLLWICLPSKKERTARQYTEVNKQVNPESSTKGGTILITFHGDLPYPSSEIIEKLESLDEEDVVGSGGFGTVYRMVMNDCGTFAVKRLDRGREGSDQGFERELEILGSIKHINLVNLRGYCRLPSTKLLIYDYLALGSLDCLLHGNSEHFMNWHTRLKIALGSARGLAYLHHDCSPKIVHRDVKSSNILLDENMEPHVSDFGLAKLLVDDDSHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELVTGKRPTDPSFLKRGQNVVGWMNTVQKENRFKEVLDKRCTDADWESVEVIIELAARCTDANADDRPLMNEVVQLLEQEVMSPCSSDLYESQINHY* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1425 606 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Amo15g1425 606 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 41 598 - -
Amo15g1425 606 SMART serkin_6 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1425 606 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Amo15g1425 606 SUPERFAMILY Protein kinase-like (PK-like) 296 587 IPR011009 -
Amo15g1425 606 Pfam Leucine Rich Repeat 144 164 IPR001611 GO:0005515
Amo15g1425 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Amo15g1425 606 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 41 598 - -
Amo15g1425 606 Pfam Protein kinase domain 320 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1425 606 Gene3D Transferase(Phosphotransferase) domain 1 395 598 - -
Amo15g1425 606 SUPERFAMILY L domain-like 26 198 - -
Amo15g1425 606 Gene3D Phosphorylase Kinase; domain 1 280 393 - -
Amo15g1425 606 Gene3D Ribonuclease Inhibitor 25 214 IPR032675 -
Amo15g1425 606 ProSiteProfiles Protein kinase domain profile. 318 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1425 Amo-Chr15 107932269 107938311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1425 1 594 Receptor kinase-like Gene Family AT2G35620 48.148 0.0 540
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Amo15g1425 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1425 - - gmx:100783363 971.459