Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1415 ATGGATAATCATGCGAACGAACCTGCAAGTTTCTGGACTCAAGCAAACGCTCTCCTCCGGAAGAATTTAACATTCCAGGTCCTTGAGCAAACTCTTCTTCTTCTGTCTTCATATGGAGCCAGTTTAATATTTCTTTTTTGTTTCTTGCAGAAGAGAAATGCGAAGACAAATGTGAGGCTAATCATGTTCCCATTCGTGCTGTGCCTGCTGCTGCTGCTTCTCCAGAAGCTGGTGGACAACCAGCTGGACAAGGACAAATACAAGTGTGGTTGCACCTGTACCAAGTCAGAAGATGGGCAGTGCCTTGAGAAAGTGTGTGGTGCTCAGTACTCAGATTTGGACCAAGTTGGTGCTTGTGCCGTTCCCAATCCTCCTGAGTGGCCTCCCGTGCAACAAGTGCCTGCCCCTAATTACAGAGCCGTCTCCGCTGACTTTATTTCCGAGTCCGATCTTCCAAACCGCTCCTGCAGGAGTAACGGCTCTTGTCCTATCACCATGCTCTTCACGGGAAAAAACCAATCATTTGGTCAAATTTTGTACAGGAATATGATCCCTAGTAACTTTACTATGAATACATCTAATGTGATGGCTAGTTTGGCCACAGATCTGCTGGGATCAGCATCAAAGACAGAAAACACCAATTTTCTTGAATCCGCTTTCTTTTCAGGCCTTCCTGTTTATTATCTACAAAAGCAATGCACAGAGAACTCTACATTTTCCTTTCCACTCCAGATAGAATCCTATAGTATACAGCAAGAGGTAACATGTGCTCAGGTTTTACCTTTGTGGCGTAATAGTCCTTCTGAAGTGAACAATGAGCTATATAAAGGTTATCGAAAAGGGAACTCCGAGAGACAGATCAATGAGATAGCTGCAGGTTACGATTTTCTAAATTCCAATCACAATATATATAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACTGGCTTTGATCCTATTGCATTGGCAAGGGTTCCTCGTTCCATAAATCTGGTATCAAATGCCTACCTTCAATTTTTGATGGGTCCTAATACCAAACTGTTGTTTGAGTTTGTGAAGGAAATGCCAAAACCTGAGACCAAAATCAAGTTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCGTCCTACAGCTTTTCCCTGTTGTTCTAACATCTCTAGTTTATGAGAAGCAACAAAAGTTAAGAATCATGATGAAAATGCATGGTCTTAGTGATGGACCATATTGGATGATTTCATATGGTTATTTTCTTGCACTATCTGTGATCTACATGCTGTGTTTTGTGCTATTTGGTTCAGGCATAGGGTTAAAATTCTTTACAAAGAATGACTACAGCATCCAATTCGTGTTTTACTTCATCTATATAAATTTACAAATTTCGCTGGCATTTCTATTGGCTTCCATGTTTTCAAATGTCAAGACCGCTACAGTAACTGCATACATAGGGGTATTTGGAACTGGGCTGTTAGGTGGTTTTCTCTTCCAGTTTTTTGTCCAGGATACATCATTCCCAAGAGGGTGGATCATTGTTTTGGAATTGTATCCTGGTTTTAGTTTATATCGTGGTCTGTATGAGTTTTCGCAATCTGCCTTCAGTGGGGATAAATTGGAAACTCATGGTATGCGCTGGGGAGATCTAAGCGATAGCACAAATGGCATGAAGGATGTCTTAATTATCATGTTTGTCGAATGGATATTCGTCCTTTTCTTTGCTTATTACATTGATCAAGTTTTTTTGTCTGGAAGTGCAAAAAGTCCCTTCTTTTTCTTGAAAAGGTTTCAGAAAAAGCCGCTCTCTTCTTTTCGGAAGCCTAGTTTGGGAAAGCAGGGATCTAAAGTTTTCATTCAGATGGATAAACCTGATGTTAGCCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCAACTATTAATCAAGCAATCGTATGTGACAACCTAAAAAAGGTCTATCCCGGGAGGGATGGTAATCCAGAGAAGTTTGCAGTAAGAGGCTTATCCCTTGCTTTGCCCAACGGGGAATGCTTCGGTATGCTTGGTCCCAATGGTGCTGGGAAGACCTCCTTTATCAATATGATGATCGGCCTCACAAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTGGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTCTGTCCACAACATGACTTGCTGTGGGAAACCCTGACAGGAAGAGAACACCTACTCTTTTATGGAAGACTTAAGAATCTTAAGGGTTCAGCCTTAACACAAGCAGTGGAAGAATCATTGAAGAGTGTAAACCTTTTCCATGGAGGAGTTGCTGATAAACATGCTGGAAAATACAGTGGGGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATCGGGGATCCTAGAGTTGTTTACATGGATGAGCCAAGTACTGGATTGGACCCAGCATCAAGAAACAACTTGTGGAATGTTGTTAGGCGCGCGAAACAGGATCGTGCTATCATCCTCACCACACATTCCATGGAAGAGGCAGAGGTCTTATGTGATCGGTTAGGAATATTCGTCGATGGTAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTGAAAGCCAGATATGGGGGAACTTATGTGTTCACAATGACAACAACTATGGATCATGAGAAAGATGTGGAGAGCATGGTGCAACAACTCTACCCGGCTGCTAAGAAGGTTTACCACATCTCTGGCACCCAGAAGTTTGAGCTCCCCAAAGAAGAGGTCAGGATAGCTAGTGTGTTCCGAGCCGTCGAAATTGCAAAGCGAAACTTCACAGTCTCTGCATGGGGTTTAGCTGACACCACATTGGAAGATGTCTTCATCAAGGTTGCCCATGACGCTCAGGCATTTGAGAAATTGTCTTAA 2916 0.4252 MDNHANEPASFWTQANALLRKNLTFQVLEQTLLLLSSYGASLIFLFCFLQKRNAKTNVRLIMFPFVLCLLLLLLQKLVDNQLDKDKYKCGCTCTKSEDGQCLEKVCGAQYSDLDQVGACAVPNPPEWPPVQQVPAPNYRAVSADFISESDLPNRSCRSNGSCPITMLFTGKNQSFGQILYRNMIPSNFTMNTSNVMASLATDLLGSASKTENTNFLESAFFSGLPVYYLQKQCTENSTFSFPLQIESYSIQQEVTCAQVLPLWRNSPSEVNNELYKGYRKGNSERQINEIAAGYDFLNSNHNIYNVSIWYNSTYKNDTGFDPIALARVPRSINLVSNAYLQFLMGPNTKLLFEFVKEMPKPETKIKFDLASLLGGLFFTWVVLQLFPVVLTSLVYEKQQKLRIMMKMHGLSDGPYWMISYGYFLALSVIYMLCFVLFGSGIGLKFFTKNDYSIQFVFYFIYINLQISLAFLLASMFSNVKTATVTAYIGVFGTGLLGGFLFQFFVQDTSFPRGWIIVLELYPGFSLYRGLYEFSQSAFSGDKLETHGMRWGDLSDSTNGMKDVLIIMFVEWIFVLFFAYYIDQVFLSGSAKSPFFFLKRFQKKPLSSFRKPSLGKQGSKVFIQMDKPDVSQEREKVEQLLLEPTINQAIVCDNLKKVYPGRDGNPEKFAVRGLSLALPNGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKHAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVVRRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGTYVFTMTTTMDHEKDVESMVQQLYPAAKKVYHISGTQKFELPKEEVRIASVFRAVEIAKRNFTVSAWGLADTTLEDVFIKVAHDAQAFEKLS* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1415 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 877 IPR027417 -
Amo15g1415 971 Gene3D - 641 915 IPR027417 -
Amo15g1415 971 Pfam ABC transporter 671 815 IPR003439 GO:0005524
Amo15g1415 971 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 48 971 - -
Amo15g1415 971 ProSitePatterns ABC transporters family signature. 788 802 IPR017871 GO:0005524
Amo15g1415 971 SMART AAA_5 679 862 IPR003593 -
Amo15g1415 971 CDD ABC_subfamily_A 653 874 - -
Amo15g1415 971 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 48 971 IPR026082 GO:0016021|GO:0055085|GO:0140359
Amo15g1415 971 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 649 886 IPR003439 GO:0005524
Amo15g1415 971 Pfam ABC-2 family transporter protein 303 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1415 Amo-Chr15 107652611 107662131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1415 626 873 Calmodulin-binding Proteins AT2G36910 22.780 4.18e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1415 - - gmx:100805474 1566.98