Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1404 ATGGATAATCATGCGAACGAACCTGCAAGTTTCTGGACTCAAGCAAACGCTCTCCTCCGGAAGAATTTAACATTCCAGAAGAGGAATGCGAAGACAAACGTGAGGCTAATCATGTTCCCATTCGTGCTGTGCCTGCTGCTGCTGCTTCTCCAGAAGCTGGTGGACAACCAGCTGGACAAGGACAAATACAAGTGTGGTTGCACCTGTACCAAGTCAGAAGATGGCCAGTGCCTTGAGAAAGTGTGTGGTGCTCAGTACTCAGATTTGGACCAAGTTGGTGCTTGTGCCGTTCCCAATCCTCCTGAGTGGCCTCCCGTGCAACAAGTGCCTGCCCCTAATTACAGAGCCGTCTCCGCTGACTTTATTTCCGAGTCCGATCTTCCAAACCCCTCCTGCAGGAGTAACGGCTCTTGTCCTATCACCATGCTCTTCACGGGAAACAACCAATCATTTGGTCAAATTTTGTACAGGAATATGATCCCTAGTAACTTTACTATGAATACATCTAATGTGATGGCTAGTTTGGCCACAGATCTGCTGGGATCAGCATCAAAGACAGAAAACACCAATTTTCTTGAATCCGCTTTCTTTTCAGGCCTTCCTGTTTATTATCTACAAAAGCAATGCACAGAGAACTCTACATTTTCCTTTCCACTCCAGATAGAATCCTATAGTATACAGCAAGAGGTAACATGTGCTCAGGTTTTACCTTTGTGGCGTAATAGTCCTTCTGAAGTGAACAATGAGCTATATAAAGGTTATCGAAAAGGGAACTCCGAGAGACAGATCAATGAGATAGCTGCAGGTTACGATTTTCTAAATTCCAATCACAATATATATAATGTCAGCATATGGTACAACTCAACCTACAAAAATGACACTGGCTTTGATCCTATTGCATTGGCAAGGGTTCCTCGTTCCATAAATCTGGTATCAAATGCCTACCTTCAATTTTTGATGGGTCCTAATACCAAACTGTTGTTTGAGTTTGTGAAGGAAATGCCAAAACCTGAGACCAAGATCAAGTTTGATTTGGCTTCTCTTTTGGGTGGTCTCTTCTTTACATGGGTCGTCCTACAGCTTTTCCCTGTTGTTCTAACATCTCTAGTTTATGAGAAGCAACAAAAGTTAAGAATCATGATGAAAATGCATGGTCTTAGTGATGGACCATATTGGATGATTTCATATGGTTATTTTCTTGCACTATCTGTGATCTACATGCTGTGTTTTGTGCTATTTGGTTCAGGCATAGGGTTAAAATTCTTTACAAAGAATGACTACAGCATCCAATTCGTGTTTTACTTCATCTATATAAATTTACAAATTTCGCTGGCATTTCTATTGGCTTCCATGTTTTCAAATGTCAAGACCGCTACAGTAACTGCATACATAGGGGTATTTGGAACTGGGCTGTTAGGTGGTTTTCTCTTCCAGTTTTTTGTCCAGGATACATCATTCCCAAGAGGGTGGATCATTGTTTTGGAATTGTATCCTGGTTTTAGTTTATATCGTGGTCTGTATGAGTTTTCGCAATCTGCCTTCAGTGGGGATAAATTGGAGACTCATGGTATGCGCTGGGGAGATCTAAGCGATAGCACAAATGGCATGAAGGATGTCTTAATTATCATGTTTGTCGAATGGATATTCGTCCTTTTCTTTGCTTATTACATTGATCAAGTTTTTTTGTCTGGAAGTGCAAAAAGTCCCTTCTTTTTCTTGAAAGGGTTTCAGAAAAAGCCACTCTCTTCTTTTCGGAAGCCTAGTTTGGGAAAGCAGGGATCTAAAGTTTTCATTCAGATGGATAAACCTGATGTTAGCCAAGAGAGGGAGAAGGTGGAGCAACTGCTACTTGAACCAACTATTAATCAAGCAATCGTATGTGACAACCTAAAAAAGGTCTATCCCGGGAGGGATGGTAATCCAGAGAAGTTTGCAGTAAGAGGCTTATCCCTTGCTTTGCCCAACGGGGAATGCTTCGGTATGCTTGGTCCCAATGGTGCTGGGAAGACCTCCTTTATCAATATGATGATCGGCCTCACAAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTGGACATAAGAACTCATATGGATGGAATATATACTAGCATGGGTGTCTGTCCACAACATGACTTGCTGTGGGAAACCCTGACAGGAAGAGAACACCTACTCTTTTATGGAAGACTTAAGAATCTTAAGGGTTCAGCCTTAACACAAGCAGTGGAAGAATCATTGAAGAGTGTAAACCTTTTCCACGGAGGAGTTGCTGATAAACATGCTGGAAAATACAGTGGGGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATCGGGGATCCTAGAGTTGTTTACATGGATGAGCCAAGTACTGGATTGGACCCAGCATCAAGAAACAACTTGTGGAATGTTGTTAGGCGCGCGAAACAGGATCGTGCTATCATCCTCACCACACATTCCATGGAAGAGGCAGAGGTCTTATGTGATCGGTTAGGAATATTCGTCGATGGTAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTGAAAGCCAGATATGGGGGAACTTATGTGTTCACAATGACAACAACTATGGATCATGAGAAAGATGTGGAGAGCATGGTGCAACAACTCTACCCGGCTGCTAAGAAGGTTTACCACATCTCTGGCACCCAGAAGTTTGAGCTCCCCAAAGAAGAGGTCAGGATAGCTAGTGTGTTCCGAGCCGTCGAAATTGCAAAGCGAAACTTCACAGTCTCTGCATGGGGTTTAGCTGACACCACATTGGAAGATGTCTTCATCAAGGTTGCCCATGACGCTCAGGCATTTGAGAAATTGTCTTAA 2844 0.429 MDNHANEPASFWTQANALLRKNLTFQKRNAKTNVRLIMFPFVLCLLLLLLQKLVDNQLDKDKYKCGCTCTKSEDGQCLEKVCGAQYSDLDQVGACAVPNPPEWPPVQQVPAPNYRAVSADFISESDLPNPSCRSNGSCPITMLFTGNNQSFGQILYRNMIPSNFTMNTSNVMASLATDLLGSASKTENTNFLESAFFSGLPVYYLQKQCTENSTFSFPLQIESYSIQQEVTCAQVLPLWRNSPSEVNNELYKGYRKGNSERQINEIAAGYDFLNSNHNIYNVSIWYNSTYKNDTGFDPIALARVPRSINLVSNAYLQFLMGPNTKLLFEFVKEMPKPETKIKFDLASLLGGLFFTWVVLQLFPVVLTSLVYEKQQKLRIMMKMHGLSDGPYWMISYGYFLALSVIYMLCFVLFGSGIGLKFFTKNDYSIQFVFYFIYINLQISLAFLLASMFSNVKTATVTAYIGVFGTGLLGGFLFQFFVQDTSFPRGWIIVLELYPGFSLYRGLYEFSQSAFSGDKLETHGMRWGDLSDSTNGMKDVLIIMFVEWIFVLFFAYYIDQVFLSGSAKSPFFFLKGFQKKPLSSFRKPSLGKQGSKVFIQMDKPDVSQEREKVEQLLLEPTINQAIVCDNLKKVYPGRDGNPEKFAVRGLSLALPNGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTHMDGIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKHAGKYSGGMKRRLSVAISLIGDPRVVYMDEPSTGLDPASRNNLWNVVRRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKARYGGTYVFTMTTTMDHEKDVESMVQQLYPAAKKVYHISGTQKFELPKEEVRIASVFRAVEIAKRNFTVSAWGLADTTLEDVFIKVAHDAQAFEKLS* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1404 947 SMART AAA_5 655 838 IPR003593 -
Amo15g1404 947 ProSitePatterns ABC transporters family signature. 764 778 IPR017871 GO:0005524
Amo15g1404 947 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 625 862 IPR003439 GO:0005524
Amo15g1404 947 CDD ABC_subfamily_A 629 850 - -
Amo15g1404 947 Pfam ABC-2 family transporter protein 279 554 - -
Amo15g1404 947 Gene3D - 617 891 IPR027417 -
Amo15g1404 947 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 624 853 IPR027417 -
Amo15g1404 947 Pfam ABC transporter 647 791 IPR003439 GO:0005524
Amo15g1404 947 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 8 947 IPR026082 GO:0016021|GO:0055085|GO:0140359
Amo15g1404 947 PANTHER ABC TRANSPORTER A FAMILY PROTEIN 8 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1404 Amo-Chr15 106661066 106670693 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1404 602 849 Calmodulin-binding Proteins AT2G36910 22.780 3.58e-12 68.9