Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1399 ATGGGGACCTCAGCGAACGCCGCTGCTGGTGGCCGTGGAAATCCCGTCGACAAGGGCGTTGACTATGCGCAGTACTTCTGCACCTACGCTTTCCTCTACCACCAGAAGGAGATGCTCTCCGATCGGGTTCGCATGGACGCTTACTTCAATGCCATCTTCGAGAACAAGCATCACTTTAATGGGAAGACTGTTTTGGATGTGGGAACTGGAAGTGGCATTCTTGCTATATGGTCAGCACAAGCAGGTGCAAGGAAGGTATATGCAGTGGAAGCTACAAAGATGTCTGAACATGCGCGTTCTCTTGTTAGAGCAAATAATCTCCAGAATATAATTGAAGTCATTGAGGGCTCAATGGAGGAAATTACACTGCCAGAGAAAGTTGATGTTATCATCTCTGAATGGATGGGTTACTTCCTCCTGCGCGAATCCATGTTTGATTCAGTTATATGTGCTCGTGACCGCTGGCTCAAACCAACAGGAGTTATGTATCCTAGCCATGCTCGCATGTGGATGGCACCTATCAGGACTGGGATAGGAGATCATAAAATGGGTGACTACCAGTCAGCTATGGATGATTGGCACAACTTTGTTGATGAAACAAAGACCTACTATGGTGTTGACATGAGTACTCTAACAAAGCCCTTTTCTGAGGAGCAGAGGAAATACTATCTACAGACATCACTATGGAGCAATCTTCATCCACATCAAGTGATAGGAACTGCTGCTATAATAAAAGAAATTGATTGTTTAACTGCCACAGTGAATGATATAGAAAAAGTCAGGTCAAAATTCTCATTGGCAATAACTATGGATAACATGAAGTTGTGTGGGTTTGGAGGGTGGTTTGATGTACATTTTCGGGGAAGAGGTGAGGATCCAGCAGAGCAGGAGATCGAGTTAACTACAGCTCCTAGTGTAGATTGTGGTACACATTGGGGCCAACAGGTGTTCCTGTTGCATCCACCCACACATGTGAGTGAAGGTGATAATTTAACCATTTCTTTCCTAATGAGTCGCTCAAAGGAAAACCATCGTCTTATGGAGGTTGAACTTGGGTGTGAAATTCAACAACATTCTGGGAAGCTTCTTGCTCCTTCCAAACATAAGTACTATATTGAATAA 1122 0.443 MGTSANAAAGGRGNPVDKGVDYAQYFCTYAFLYHQKEMLSDRVRMDAYFNAIFENKHHFNGKTVLDVGTGSGILAIWSAQAGARKVYAVEATKMSEHARSLVRANNLQNIIEVIEGSMEEITLPEKVDVIISEWMGYFLLRESMFDSVICARDRWLKPTGVMYPSHARMWMAPIRTGIGDHKMGDYQSAMDDWHNFVDETKTYYGVDMSTLTKPFSEEQRKYYLQTSLWSNLHPHQVIGTAAIIKEIDCLTATVNDIEKVRSKFSLAITMDNMKLCGFGGWFDVHFRGRGEDPAEQEIELTTAPSVDCGTHWGQQVFLLHPPTHVSEGDNLTISFLMSRSKENHRLMEVELGCEIQQHSGKLLAPSKHKYYIE* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1399 373 Gene3D Vaccinia Virus protein VP39 20 164 IPR029063 -
Amo15g1399 373 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 19 350 IPR025799 GO:0016274|GO:0018216
Amo15g1399 373 CDD AdoMet_MTases 63 163 - -
Amo15g1399 373 Pfam Ribosomal protein L11 methyltransferase (PrmA) 60 133 - -
Amo15g1399 373 Gene3D - 166 373 - -
Amo15g1399 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE PRMT10 12 361 - -
Amo15g1399 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 29 357 IPR029063 -
Amo15g1399 373 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 12 361 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1399 Amo-Chr15 106390331 106395658 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1399 24 332 C2H2 Transcription Factor Family AT3G12270 31.212 1.67e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1399 K11434 - gmx:100790625 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g1399 15 106390331 106395658 Amo15g1399 15 106390331 106395658 ECH