Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1389 ATGGCTCATGCCGTCGCTTCTGCTGCCGGCTCCCCCGACGTCTTCTCCTCCCTCGCTGCCCTCCGCTCTGGCCAGTACCGCACTGGATTTGGCGCCATCCTCTCCGCTGGTACCTTGCTCTCCGCCCTCGTTGTCGGATTCGTCGCCTTCTACGCCACTCCGTTCTCCCTCGACCCCGCACCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAACGATGTTCCTCTTCTATGTGTATCTTAGCACGGAGATCTTCCTATGGCAGGCGATTAGATTTGTAGTGTTTTATGCATTCTTCGTTGGTCTCAGGCAAGAGTGGGAATCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTTGGGATCTATGAACGATGAGAAGCGCAGTTCTGGATTTTCGGGAGCTTATGGATTGATTCCTGTTGCAACTCTCAAACTGTCGATCCCTGAGCCAGCGCTGTCGCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCTTTTTGTCCGATAGCCCTCTTGTATGCTTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCTTCCCCAACACTGACTTGCCCCTCTAG 627 0.5327 MAHAVASAAGSPDVFSSLAALRSGQYRTGFGAILSAGTLLSALVVGFVAFYATPFSLDPAPFVRDVLFYLTATMFLFYVYLSTEIFLWQAIRFVVFYAFFVGLRQEWESSTDLEEQKELVAVHVDSDAKVLGSMNDEKRSSGFSGAYGLIPVATLKLSIPEPALSQWSRLYSSANIAFCPIALLYACKSFVPFDHPIAFLFPNTDLPL* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1389 208 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 8 117 - -
Amo15g1389 208 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 152 206 - -
Amo15g1389 208 Gene3D - 2 133 IPR044880 -
Amo15g1389 208 Pfam Sodium/calcium exchanger protein 5 101 IPR004837 GO:0016021|GO:0055085
Amo15g1389 208 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 152 206 - -
Amo15g1389 208 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 8 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1389 Amo-Chr15 105556094 105557247 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1389 5 208 Antiporters AT1G08960 57.919 7.43e-73 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1389 K13754 - gmx:100775437 254.988