Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1388 ATGACACACTATAATCATGTTGATATCATTGTTTTCCAAGGTGATAAAAAGGATTCAGTGACATCAAGTCAAACCCTAGATTTGACATCTGGTTTTGAAGTTGGCCCAACAACAAATAGTGCACGCGATGCGGTATCATGTCATAGTGCTCGGTCGGTGTTGACTATTGCCTTCCAGTTTCCTTTTGACAGTAGTCTACAGGATAATGTTACTGTCATGGAACGCCAGTACATCCATAGTGTGATTTCCTCTGTGCAGAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAAGTTGCTGAGATCTGATTCTCTCATTAGTGAGTCAGTGCTTAAACATTTGTGGCATCATCAGGATGCCATTTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTCATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTAAAAGACATCACATGGGCTGCAGAGGCTTGGATTGATGTTGAAAGAGTTCATACAATTGCATTAGGAGCCAAGAAGAACTAG 603 0.4411 MTHYNHVDIIVFQGDKKDSVTSSQTLDLTSGFEVGPTTNSARDAVSCHSARSVLTIAFQFPFDSSLQDNVTVMERQYIHSVISSVQRVAMAISPSGINPAVGSKLSPGSPEALTLANWICCKLLRSDSLISESVLKHLWHHQDAILCCSLKSVPVFIFANQAGLDMLETTLVALKDITWAAEAWIDVERVHTIALGAKKN* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1388 200 Pfam MEKHLA domain 118 181 IPR013978 -
Amo15g1388 200 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 14 179 IPR044830 GO:0003700
Amo15g1388 200 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 14 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1388 Amo-Chr15 105553734 105555122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1388 14 178 Homeobox Transcription Factor Family AT5G60690 65.341 1.20e-62 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1388 K09338 - aip:107640931 350.132