Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1369 ATGCTTTCAGGTGTTACTGTCGTGATAGAATTGATTCAGAGAATTGTTATCCACAACCAGTTTCGTTCCCAAAGGTCAAGATATGAGGCCAAGAGAGGACAACTAGAGAGTACTAGACAAACAGCCATCGACTTCGGTTGCTGGTCAAACCCTCCCATGCCATATCCTCTCACAGACACTTTTTTCTCCTTCTTGATGACATATTCAGACACACCCTCCTCCAGTTCTTCAATCTCTCTCTTTCTTCCATGCTCTCATTTTGATTCATCTCAAATGATTAAACCAACTCTCCCCTACATCCTCCTCAAGTTCTTGTTACGTTTTCCCCTTATTAGTACCCTTCACAATCACATCGTTATCCTCCTCTTCTTGGTCCAAATCAAAGTGACTTTCTCTGCTACAGCTCCAAACTTCACAGCTTGCGAGCCCGTGAATTGTGGTCACGGCCCAGATATAAGCTACCCTTTCTACATCACAGGGAAACAAAAACCCTTTTGTGGGTACCCAGGTTTTGAYCTCACTTGTGGCAAAAATGGCTTCCCAATTCTCGATCTCWTCAACACCCAACACATCATCCAACAAATCTTCTATAACAACAACTCACTCCGAGTCTCCAACCCCGTTTTTTCAACTCCAAACACTTCTCAGTGCATTCTTCCCACAMAGAATCTCACCGTTGGCAAGTACAGGTTTCGTATTGCTCCCAATCAGAGGAACCTCTTCGTGTTCTATGGTTGTAACTTAACGTTGCTTCCTGAAGAGATGAAAGAACATAAAATCGGGTGTTCTGTTCATGAAAACAGAACGAGTAGTAATTTATCCGTTGTGGCGTTGTATGCGGAAGACGTCACGAATGTGAGATTAGCGGAAGAGAATTGCAGAGGTGGGTGGGTGAATGCAACGGTGGAAGATGGAAAGGGAGGGAATGTTCGAGAAGCTCTTGAAGAAGGGTTTGTGATGAGTTGGAATGCAAGTAATTGCAGCACGTGCTTGAATAGTGGAGGAAGATGCGGGTTTGATACAAGCCCAGCTATATACGCTTTCAGGTGCTTCTGCCGTGATCGAGTTCATATTGCGCAGTGTAATCTTCCACCTGGACCACAACAACCAGAGAAAAAAAGATTGAGCAAGGCTCGGAAAGTTGGCATAGCATTAGGTATCATACTCCCAAGCATCTTAATCATTGGATTGCTCCTTCTGTTCTTCAAACGAAGACGTAGTTTCTCACGTGAATTCCAGACAAGAAACACTTATGCTGATCACTCCTCAAATCCAGACGTAGAAGGCGGAAGCGTGTACTTTGGAATTCCCCTTTTCTCCTACAAGGAGCTTGAAGAAGCAACAAGCCGCTTCGACCTTAATAAACAAGTTGGAGATGGAGGATTCGGGACCGTCTACTATGGGAAACTCCATGACGGACGAGAAGTTGCCGTGAAACGCTTATACGAGCACAACTACAGACGAGTTGAGCAGTTCATGAACGAAGTGCAGATCCTCACACGTTTGCGCCACAAGAATCTTGTGTCCCTCTATGGCTGCACTTCACGCACGAGCCGCGAACTACTGCTTGTATATGAATATATTCCCAACGGAACTGTTGCTTCTCATCTTCATGGTGAATCAGCAAAGCCTGGCTTACTACCTTGGTCCACAAGAATGAAAATTGCTGTAGAAACTGCTAGTGCTTTAGCTTATCTCCATGCTACTGACATCATTCACCGCGACGTAAAAACCAACAACATTCTTCTTGATTACAGTTATTGCGTTAAAGTTGCAGACTTTGGCCTTTCAAGACTATTCCCCAATGATGTTACACATGTCTCYACGGCGCCACAAGGAACTCCGGGWTATGTTGATCCGGAGTATTACCAATGTTATCAGCTTACGAGCAAGAGTGATGTGTATAGTTTTGGAGTCGTGCTGATCGAGTTAATATCGTCTCAGCCGGCTGTTGATATGAACAGAGACAAGGATGAGATTAATTTGTCTAATCTCGCCATAAAGAAGATTCAAGAAGGTTCACTTGTTGAGCTTGTTGACCCTTGTCTGGGTTTTGATTCGGACAATGAGGTTAAGAGGATGGTTGTTTCGGTTGCGGAATTAGCTTTTCAGTGTTTGCAACRGGACAAGGAMTTGAGACCTTCAATGGAGAAAGTGTTGGARATGCTGKWGAGAATTGAGAGTGGGAAGCATGAACCAGAGCATTTAGAAGTAGTAGATGCTGGTCATGGTGTCAGTAATGTAAATTCTCAACAACCACAACCTTCAATTTCACCAGAATGGGACCAAATTGTGTTGTTGAAGAATGTGAAGCCACCTTCTTCGCCAATAACTGTTACTGATAGCTGGGAAAGTGAATCMACTACGCCTAATGTTAGTGCTTAA 2385 0.4382 MLSGVTVVIELIQRIVIHNQFRSQRSRYEAKRGQLESTRQTAIDFGCWSNPPMPYPLTDTFFSFLMTYSDTPSSSSSISLFLPCSHFDSSQMIKPTLPYILLKFLLRFPLISTLHNHIVILLFLVQIKVTFSATAPNFTACEPVNCGHGPDISYPFYITGKQKPFCGYPGFDLTCGKNGFPILDLXNTQHIIQQIFYNNNSLRVSNPVFSTPNTSQCILPTXNLTVGKYRFRIAPNQRNLFVFYGCNLTLLPEEMKEHKIGCSVHENRTSSNLSVVALYAEDVTNVRLAEENCRGGWVNATVEDGKGGNVREALEEGFVMSWNASNCSTCLNSGGRCGFDTSPAIYAFRCFCRDRVHIAQCNLPPGPQQPEKKRLSKARKVGIALGIILPSILIIGLLLLFFKRRRSFSREFQTRNTYADHSSNPDVEGGSVYFGIPLFSYKELEEATSRFDLNKQVGDGGFGTVYYGKLHDGREVAVKRLYEHNYRRVEQFMNEVQILTRLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTVASHLHGESAKPGLLPWSTRMKIAVETASALAYLHATDIIHRDVKTNNILLDYSYCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSQPAVDMNRDKDEINLSNLAIKKIQEGSLVELVDPCLGFDSDNEVKRMVVSVAELAFQCLQXDKXLRPSMEKVLEMLXRIESGKHEPEHLEVVDAGHGVSNVNSQQPQPSISPEWDQIVLLKNVKPPSSPITVTDSWESESTTPNVSA* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1369 794 Pfam Wall-associated receptor kinase galacturonan-binding 141 205 IPR025287 GO:0030247
Amo15g1369 794 ProSiteProfiles Protein kinase domain profile. 451 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1369 794 MobiDBLite consensus disorder prediction 773 794 - -
Amo15g1369 794 ProSitePatterns Serine/Threonine protein kinases active-site signature. 571 583 IPR008271 GO:0004672|GO:0006468
Amo15g1369 794 Pfam Protein kinase domain 453 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1369 794 SMART serkin_6 451 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1369 794 Pfam Wall-associated receptor kinase C-terminal 304 354 IPR032872 -
Amo15g1369 794 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 115 785 - -
Amo15g1369 794 CDD STKc_IRAK 457 726 - -
Amo15g1369 794 Gene3D Transferase(Phosphotransferase) domain 1 528 736 - -
Amo15g1369 794 SUPERFAMILY Protein kinase-like (PK-like) 432 735 IPR011009 -
Amo15g1369 794 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 115 785 IPR044652 -
Amo15g1369 794 MobiDBLite consensus disorder prediction 771 794 - -
Amo15g1369 794 ProSitePatterns Protein kinases ATP-binding region signature. 457 479 IPR017441 GO:0005524
Amo15g1369 794 Gene3D Phosphorylase Kinase; domain 1 428 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1369 Amo-Chr15 104798999 104829443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1369 326 794 Receptor kinase-like Gene Family AT1G25390 56.383 1.07e-168 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo15g1369 Pkinase 8.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1369 - - aip:107643858 1551.57