Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1353 AAACTTACAGTTTATGGATTACTATTTATTTATTTAATTTATGCAGGATCCGCAATTGGATTCAAGTTGGATAGTCTTTTAAAGCTTACTGACACTCGTGCTTCTAAAAATAAGATGACACTGATGCACTATCATTGCAAGGTTCTAGCTGATAGGTCGCCAGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGGTGATGATTTATGCTTGGTTGGAAAAAGAAAACCCGTGTCAGGCGCTGAATCTGTTCCAGGAAGGCAAAGTCAGTGGAAAGGATAATACAAAGACTAATGAGACTAAGGATGATGCGGGAAAAGATGGTACTGGTGCAAAGAATGATACAAGGAGCGATGCCCAAGCAGCTGAAAAAAGCGAGAGAGAGAAATCTAACCCAGAACCTCCTCCGGAGAATGAGTTTGAGAAGCGAATAAGACCAAAGACATTCTACACAAAGATCGAGAGTGAGGAAGCTGCAATACATATCAGAGTTAGAGAGAGGTGTAACTTCATTTCAGAGTATTAG 543 0.4107 KLTVYGLLFIYLIYAGSAIGFKLDSLLKLTDTRASKNKMTLMHYHCKVLADRSPGLLDFHLDLVSLEAATKVMIYAWLEKENPCQALNLFQEGKVSGKDNTKTNETKDDAGKDGTGAKNDTRSDAQAAEKSEREKSNPEPPPENEFEKRIRPKTFYTKIESEEAAIHIRVRERCNFISEY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1353 180 SUPERFAMILY Formin homology 2 domain (FH2 domain) 14 74 - -
Amo15g1353 180 PANTHER FORMIN-J 16 80 - -
Amo15g1353 180 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 180 IPR015425 -
Amo15g1353 180 Gene3D Formin, FH2 domain 13 169 IPR042201 -
Amo15g1353 180 MobiDBLite consensus disorder prediction 98 153 - -
Amo15g1353 180 MobiDBLite consensus disorder prediction 95 153 - -
Amo15g1353 180 Pfam Formin Homology 2 Domain 16 74 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1353 Amo-Chr15 104280146 104282840 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1353 4 74 FH2 protein (formin) Gene Family AT2G25050 63.380 4.73e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1353 - - adu:107468267 110.538