Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1344 ATGATGAACCTTTCCTTCTTTGGTAGGAAGCTACAACATCTTTTTAGCCCTTATTTCCAATTCAACTTCAACTCATTTTTCATTCAGCTTTGTTATTTTATGATCATGTCTSTTTTTGGATACTTGGGTCTCAAGGTATCYAAYCCAAAAACCTATGTTAAGCCTAAGAACTTCGACCTGTTTTATACTTCTGTCTCTGCTTCTACTGTCTCAAGTATGACGGCCATAGAAATGGAAGTTTTCTCTAACTCCCAACTCGTCCTCATAACTTTTCTTATGTTTTTTGGTGGTGAAGTTTTCARTTCCTTACTAGAACTTGTCTTTGCTAGGTTCAATAACAATTCATTCACTTCCATGAAAAATGATTATAGTGTCAAAGTTAGTACTAATAATAGTCTTCCAATAAAAAAGGTCAATGATCAAATTGAGCTTGGTTTAGTTTCTATTCCTAATCATCACTCATCACAAGACCAAAACCAAGTCATTGATGTCAATTATGATATTAACAATAAAGATATGCTACTTAGGTCTAACTCCCTTAAGTATTTGAGTCATGTAGTTTTAGGTTACTTTTTGGTGCTTCAATTTGTTGGCACTTTCTTGGTTTCTATGTACATGAGCTTCATACCTAGTGCAAGGCAAGTACTTAGAGAAAAAGGTATCAAAACCCTAACATTTTCTTTATTCACCATAGTTTCAACTTTTGCAAGTTGTGGCTATGTCCCCACAAATGAAAATATGATAGTTTTCAAGAAGAATTCAGGCCTTCTTATTATTATTCTCCCATATATCCTTCTTGGTAACACCTTATATGCACCATGCTTGAGGTTTGTGATTTGGGTTCTTGAGAAAATTACCAAAAGAGAGGAATTTTCATACTTGCTTAAGAATTCAAAGGAAATAGGTTATGGTCATTTGCTACCTGCCCTTCATTCTTGGCTACTTGTTGCTACCGTTTTGGGGTTCAATATAATTCAATTTGTGATTTTTTGTTCCATGGAGTGGGGAACACAAATCACGGATGGTTTGAATCCTTATCAGAAATTTGTTGCGTCTTTGTTTCAAATCACAAATGCTAGACATTCTGGTGAATCCGTTTTTGATCTCTCTACTATCTCTTCAGCTATATTGGTCCTCTTTGTCGTCATGATGTACCTTCCACCATACACAACATTCATGCCCATAATGGACCACAAAACTGAAAATGATGCCAAGAGAGACAAAAGAAGCCTAGTGGATGCATATGGGAACGTAGGTTTCTCAATGGGATATAGCTGCGCAAGGCGATTGAAAGCGAATGGTAGTTGCAAAGATTTATGGGTTGGATTTTCTGGGAAATGGAGCAACAAAGGCAAGTTCATCCTTATTCTTGTCATGTTCTTCGGAAGGCTCAAGAAATTCAACATGAAAGGTGGCAAAGCTTGGGACCTATCCTAG 1437 0.3633 MMNLSFFGRKLQHLFSPYFQFNFNSFFIQLCYFMIMSXFGYLGLKVSNPKTYVKPKNFDLFYTSVSASTVSSMTAIEMEVFSNSQLVLITFLMFFGGEVFXSLLELVFARFNNNSFTSMKNDYSVKVSTNNSLPIKKVNDQIELGLVSIPNHHSSQDQNQVIDVNYDINNKDMLLRSNSLKYLSHVVLGYFLVLQFVGTFLVSMYMSFIPSARQVLREKGIKTLTFSLFTIVSTFASCGYVPTNENMIVFKKNSGLLIIILPYILLGNTLYAPCLRFVIWVLEKITKREEFSYLLKNSKEIGYGHLLPALHSWLLVATVLGFNIIQFVIFCSMEWGTQITDGLNPYQKFVASLFQITNARHSGESVFDLSTISSAILVLFVVMMYLPPYTTFMPIMDHKTENDAKRDKRSLVDAYGNVGFSMGYSCARRLKANGSCKDLWVGFSGKWSNKGKFILILVMFFGRLKKFNMKGGKAWDLS* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1344 478 PANTHER SODIUM TRANSPORTER HKT1 17 408 - -
Amo15g1344 478 PANTHER SODIUM TRANSPORTER HKT1 412 478 - -
Amo15g1344 478 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 17 408 - -
Amo15g1344 478 Pfam Cation transport protein 178 386 IPR003445 GO:0006812|GO:0008324|GO:0055085
Amo15g1344 478 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 412 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1344 Amo-Chr15 104001450 104005460 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1344 45 477 Inorganic Solute Cotransporters AT4G10310 43.558 1.05e-133 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1344 K24976 - gmx:100779582 570.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g1344 15 104001450 104005460 Amo15g1344 15 104001450 104005460 ECH