Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1336 ATGGGACTGGAAGAACTCCCAGATTGCACACAAGCTTGTGATACTTCTTCACAAATGTCTTGCATGAGTGATGGATATAACCAACACCAAAGTCCAGTTTCCCCTATAACAAGAAACCAGTGCTTGGGGACTTCTAGAAGGGACAATGCCTTAATCAGAAATTCACGATTTTCACTTGAACCAATCCCATGGAGGCAACCTGATGCAAGCCAAGATCCTGATTTACAAGTTTCCAAGGGAAGTGAGACTTTGACAACAGCTTCAAAACCCTCCCACTCTGTATATGGTGAAATTGAGAAAAGGATTGCAGATCTTCAGTTTAAAAATTCAGGAAAAGATCTCAGAGCCCTTAAGCAGATTCTGGAAGCAATGCAGAGATACAGAGATTCACTAGATATTACAAGAGACCAGGAAACAAATTACCCTTCTGACAGAGGTCTGAGTGAAAGCTCGAAACTACAGACCCCAAGACAACAGACCAACCCAACATTTGTCACTGATGATATTTCAAGTTCACCCCGGGGTAAAAAGTTTCCAATTATCATCATGAAGCCAGCACAAATCTCAAGAAAATCCAATGTCGCTACCAAAGAAATGACTAATGGCAAATCAGGCCGCATCAAGTTTTCTACCAATGATCCCAAAGATGGAAGATTGCTTGACAATATTCAAAGTCAAACAACAAAAGGAACCAGTTCAACAAATCCTTTTAGTCAACGCTTCCATTCTGCAGATAAGAGTAACATAAAGAAAACTTCAAAATTAATGCAAGCCTCAAAAGTCCCTCAGGTCATCAATGGAGAGGACACCAATAACTCCAGCCATACAGCAGAGACTAGAAGCCCAAGACAAAGAAATGAAGGCTTCAGCAAGATCCGGTGTCAAAAGAGGAACTTTAAGCATCAAGTTGATGTTATTTCCTCCAATGTTGACAGCAACAGAAGCATGGATTCTCACCGTGACATAGAGGGCACCCAAGCTGATCATTCTGAAAGCAACAACAGTATTTCCATTCAACAGGTGACTCACATGAATCAAAATACTGCTACAAAGGAGCTAAGCAAGGAAAGTGCTATGGCCATGATAACAGCTACTTCAGAACAACGAAATGAAGCTTTAGCCACTCCTGATGACATAGGGCATGCATTGAACCTTCCTCTTTCATTCAATAACACAAAGGCCAACTTCAGCAATGGAACCAGTGATGATGACCTTCAAACTCAGAATTTGGATAAAGTTCTTTGGCAAAATGAAGATAATAGCGAGAAATTCATCAATTGCAGAGAGAAAAGATTCTGA 1299 0.4072 MGLEELPDCTQACDTSSQMSCMSDGYNQHQSPVSPITRNQCLGTSRRDNALIRNSRFSLEPIPWRQPDASQDPDLQVSKGSETLTTASKPSHSVYGEIEKRIADLQFKNSGKDLRALKQILEAMQRYRDSLDITRDQETNYPSDRGLSESSKLQTPRQQTNPTFVTDDISSSPRGKKFPIIIMKPAQISRKSNVATKEMTNGKSGRIKFSTNDPKDGRLLDNIQSQTTKGTSSTNPFSQRFHSADKSNIKKTSKLMQASKVPQVINGEDTNNSSHTAETRSPRQRNEGFSKIRCQKRNFKHQVDVISSNVDSNRSMDSHRDIEGTQADHSESNNSISIQQVTHMNQNTATKELSKESAMAMITATSEQRNEALATPDDIGHALNLPLSFNNTKANFSNGTSDDDLQTQNLDKVLWQNEDNSEKFINCREKRF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1336 432 MobiDBLite consensus disorder prediction 193 208 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 311 333 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 62 93 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 254 288 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 193 220 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 254 279 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 133 172 - -
Amo15g1336 432 PANTHER LONGIFOLIA PROTEIN 1 369 - -
Amo15g1336 432 MobiDBLite consensus disorder prediction 71 92 - -
Amo15g1336 432 PANTHER LONGIFOLIA PROTEIN 1 369 IPR033334 GO:0051513
Amo15g1336 432 MobiDBLite consensus disorder prediction 140 170 - -
Amo15g1336 432 Coils Coil 117 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1336 Amo-Chr15 103418503 103420208 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1336 52 268 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 31.224 1.18e-17 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1336 - - ahf:112783057 774.622