Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1299 ATGGACTGCAATAAAGAAGAGGCCATGAGGGCCAAGGATATTGCTCAAATGAAGATGAAAAACAGGGATTTTACAGGGGCCCGCAAATTTGCTCTTAAGGCTCAGAAGTTATATCCTCATCTGGAGAATCTAGCTCAAATGATTAGTGTATGCGATGTCCACTGCTCTGCTGAGCAGAAATTGTTTGGCAATGAGATGGATTGGTATGGAATTCTTCAACTTGAGCAGACAGCTAGTGATGAAACAATTAAGAAGCACTACAGGAAATTTGCCCTCCTACTTCATCCTGACAAAAACAATTTTGTTGGTGCAGAAGCTGCTTTTAAGCTGATTGGGGAAGCTCAAAGGGTGCTCTTAGACAAAGATAAACGATATCAGCATGACATGAAACGTGGAGTTCCAGTCAACAAAACTGCTTCATCATGTCATAATCAGCAGAAGGCTTATACAAATTCTAATTCTTCGGTGAAAACAAATGTCAGACACAATTTTACAAACTCAAGTCATCGTCAGCAGCAATCCAGGCAGACAGCACAGCAGGGACCAAACAATAGCCGCCAAACCTTTTGGACTAGCTGTCCATTTTGCAAAGTGAAGTATCAGTATTACAAAGAAGTTTTAAATAAATCTCTTCGCTGTCAAAATTGCCACAAGCCTTTCATTGCATTTAATGTGGATAAGCAACGCACTTCACGAGCAAATGATTCAAGTCGGCCAGAGTCTGGACAACATAAAGATGATCAGCATCATGGTACTTCCAAGGAAGGTCCTAGAGCTCAAGGAAATTTGCATTCTGAGCGGTCTAATGCAGAAACTTTTGAGAAAAAGGGCTCTGCTAACGTCTCTGGAAAGACCAATGGAAATAAAAAGAGGAAGCAGATGGAGGAGTCAAGTGAAAATCATAGTGAAATTCATGACGAGGTCAGAGGAAAACAAGCAGCGGGAGGCTCTAAGGAGATGGATGAAAATTCAGAGCATTCTTATCCAGATTTAACCTCCAAAGCAAAACATCATCCAAATGTTTACTTATATCCTGATGCAGAGTTCAATGACTTTGACATGTTCAAGAGAAAAGAATGTTTTGTTGCTGGGCAGATTTGGGCTATTTATGATACAGCAGATGCCATGCCTAGATTCTATGCTTTAATCAGAAATGTTCTCTCTCCTGGATTCAAGGTCAAGATAATGTGGTTTGAGCCACATCCAGATGACAATGATGAAATCAACTGGGTAAATGAGGATTTGCCTGTAGCTTGTGGTAAGTATAAACCTGGTAGAACTGACATCACTGAAGATCATTTGATGTTCTCTTATATGGTTTCTTTTGAAAACATTTGCGGCAATACTTTTAAAGTGTATCCTAGAAAGGGAGAAATTTGGGCTCTATATAAAAATTGGGATATCAAATGGTACATGGATGTTGAATCACATCAGCAGTATGAATTTGAGCTTGTTGAAATTTTGTCAGATTATGCTGACGGTGTTGGTTTATTTGTTGCTTATTTGTTTAAGTTGAAAGGTTTTGTAAGTCTCTTCTGTCGAAGTATGAAGGCAAGTAACTGCCCACTTCAAATTCCGCCAGCAGAGCTATACAGATTCTCTCACAGGGTTCCATCTTTCAAGATGAATGGTGAAAAAGGTGTAAATGTTCCTAAAGGAACTTATGAACTTGATCCTGCATGTTTGCCGATGAATATTGAAGAGATTGATGCTCCAGAAGGTTTGGATATGGAGATTGGTCATAGTTCATATGGAAGTGAGAATACAACACCTTTGATGACATCTGAGGATGTATCTGCAGGTAAGGTTAATTTGGAAAGAATCAATTTGATGAAGGAAACTAAGGATTCTGTTAATTATTCGGTCAACCCTCATGCTCCCATAGCTTCTACCTCAGAAGCTATTGAAGTCCCAGAATCTTTGTTGTTTGATTTTGAAGCTGGGAGGTCTCTTGAAAAGTTCCATGTCGGTCAGATTTGGGCATTTTACAGTGATGAGGATGGATTGCCGAAGTACTATGGTCAGATTATTAAGATCAAGACTAGCCCAGATGTGGAATTGAATGTTACTTGGCTTACTTGCTGCTGGCTTCCAGAAATTACTATTAGATGGGAAGACCAAGACATGCTTATTTCCTGTGGCAGATTTAAAATTAGTCACACAGTTCAACAGAGTGTTTACAGCAATACCTCTTCTATTTCCCATCTTGTGCATGCTGATCCTGTTGGCGAGGGCGAATATTATGCCATCTTCCCAAGTAAAGGTGAAGTTTGGGCCATATATAAAACATGGTCAAGTAAAATCAAATGTTCTGACTTGAAAAATTGTGTGTATGACATAGTGGAAGTTCTTGGGGGAAACGATTTGTGGACAGAAGTTCGAGTTTTGGAGTTAGTCAGTGGTTTCAGTTCAGTTTTCAGGAGCCAATCAACTGTAGAATTGAGAATCCCGAGAGAAGAATTGCTTAGGCTCTCTCATCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGCAATTTGAGAGGCTTTTGGCAAGTTGATCCAGGGGCTCTACCAAGCCACTTCAGCTCAAAATAG 2577 0.3989 MDCNKEEAMRAKDIAQMKMKNRDFTGARKFALKAQKLYPHLENLAQMISVCDVHCSAEQKLFGNEMDWYGILQLEQTASDETIKKHYRKFALLLHPDKNNFVGAEAAFKLIGEAQRVLLDKDKRYQHDMKRGVPVNKTASSCHNQQKAYTNSNSSVKTNVRHNFTNSSHRQQQSRQTAQQGPNNSRQTFWTSCPFCKVKYQYYKEVLNKSLRCQNCHKPFIAFNVDKQRTSRANDSSRPESGQHKDDQHHGTSKEGPRAQGNLHSERSNAETFEKKGSANVSGKTNGNKKRKQMEESSENHSEIHDEVRGKQAAGGSKEMDENSEHSYPDLTSKAKHHPNVYLYPDAEFNDFDMFKRKECFVAGQIWAIYDTADAMPRFYALIRNVLSPGFKVKIMWFEPHPDDNDEINWVNEDLPVACGKYKPGRTDITEDHLMFSYMVSFENICGNTFKVYPRKGEIWALYKNWDIKWYMDVESHQQYEFELVEILSDYADGVGLFVAYLFKLKGFVSLFCRSMKASNCPLQIPPAELYRFSHRVPSFKMNGEKGVNVPKGTYELDPACLPMNIEEIDAPEGLDMEIGHSSYGSENTTPLMTSEDVSAGKVNLERINLMKETKDSVNYSVNPHAPIASTSEAIEVPESLLFDFEAGRSLEKFHVGQIWAFYSDEDGLPKYYGQIIKIKTSPDVELNVTWLTCCWLPEITIRWEDQDMLISCGRFKISHTVQQSVYSNTSSISHLVHADPVGEGEYYAIFPSKGEVWAIYKTWSSKIKCSDLKNCVYDIVEVLGGNDLWTEVRVLELVSGFSSVFRSQSTVELRIPREELLRLSHQIPAFKLTEEHGNLRGFWQVDPGALPSHFSSK* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1299 858 PRINTS DnaJ domain signature 87 102 IPR001623 -
Amo15g1299 858 PRINTS DnaJ domain signature 103 123 IPR001623 -
Amo15g1299 858 PRINTS DnaJ domain signature 69 87 IPR001623 -
Amo15g1299 858 MobiDBLite consensus disorder prediction 128 186 - -
Amo15g1299 858 MobiDBLite consensus disorder prediction 288 333 - -
Amo15g1299 858 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Amo15g1299 858 MobiDBLite consensus disorder prediction 137 186 - -
Amo15g1299 858 CDD DnaJ 67 120 IPR001623 -
Amo15g1299 858 Gene3D DnaJ domain 64 185 IPR036869 -
Amo15g1299 858 SMART dnaj_3 66 123 IPR001623 -
Amo15g1299 858 Pfam DnaJ domain 67 128 IPR001623 -
Amo15g1299 858 PANTHER - 1 301 - -
Amo15g1299 858 PANTHER - 307 856 - -
Amo15g1299 858 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 307 856 - -
Amo15g1299 858 MobiDBLite consensus disorder prediction 227 334 - -
Amo15g1299 858 SUPERFAMILY Chaperone J-domain 62 131 IPR036869 -
Amo15g1299 858 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 301 - -
Amo15g1299 858 MobiDBLite consensus disorder prediction 231 254 - -
Amo15g1299 858 Pfam Domain of unknown function (DUF3444) 633 836 IPR024593 -
Amo15g1299 858 Pfam Domain of unknown function (DUF3444) 341 545 IPR024593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1299 Amo-Chr15 101772688 101776541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1299 4 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.159 6.62e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1299 - - adu:107491294 1736.08