Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo15g1291 | ATGCAAACTCATCATCACTCTTTCTCATCCTACATATCCTCTTGTGGGAGTAGTAGTACTACTAGTCCCTTCTTGGACAATCCCGAAGATGCCGATGTTGTGCTTCTTGATGACGAAGAAGCCTCCATTTCCCTTTCTCTTGGGCCTCCCGGCCAACATCACAACCCCAAGATCTCTACAACTTCACCACTACTACTGCAACATAACCCTAACTGTGATGATGACCAGAGTGGTGTAACCGTTGCTCTACACATTGGCCTTCCTTCCACAACAACAACAACTGCACCCAACACCACCACCACCATCAGCACCACAACAAGTAAAACTGATAGCCTTCAGGGTCAGTACTGGATCCCTTCCCCTGCACAAATCCTCATTGGTCCCACTCAGTTCTCTTGCACTGTCTGCAACAAAATGTTCAATCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGGTCACAATATAGGAAAGGACCAGAATCATTAAGAGGAGCAAAGCCAGCATCTTCAATGCTGAGGCTACCATGCTATTGTTGCGCGGAAGGTTGCAAGAACAACATAGAGCACCCAAGATCAAGGCCTCTCAAGGATTTCAGGACACTGCAGACTCACTACAAGAGAAAGCATGGCGCCAAGCCCTTCGGCTGCCGCAAGTGCGGTAAGCCCTTCGCCGTCCGAGGAGATTGGAGGACGCACGAGAAGAATTGCGGCAAACTTTGGTTTTGCATATGTGGCTCCGATTTCAAGCACAAGAGATCCCTCAAGGACCATGTCCGCGCTTTCGGCGACGGCCATGCTCCTCATACTGTGGAGAGCTGTGACCAGTTCGTCGATGAAGAAGAAGATGATTATGAACTTGATGATGACGACGACCTAGACTTAGAAGATAATAACAACAATAATAGTAACGGCAATCAAGGTCTAAGAAATGATGGACTAAGCAATATTGAAGAGGGTGTGTTTGCTGCTGTTGTTGTCATGGTGTGTGTTAATGTTGTTATCACAATTGTTCACAGCAAGAGAGAAAGAGATAGAGAGAGAGAAAAGGAGTGCGAGAAGATGGAGACAAACAGTGAAATGAAAGGTAATAAGGTTCTTGCATTAAATGCTGGAAGTGGCAGTCTTATCTAA | 1137 | 0.4635 | MQTHHHSFSSYISSCGSSSTTSPFLDNPEDADVVLLDDEEASISLSLGPPGQHHNPKISTTSPLLLQHNPNCDDDQSGVTVALHIGLPSTTTTTAPNTTTTISTTTSKTDSLQGQYWIPSPAQILIGPTQFSCTVCNKMFNRFNNMQMHMWGHGSQYRKGPESLRGAKPASSMLRLPCYCCAEGCKNNIEHPRSRPLKDFRTLQTHYKRKHGAKPFGCRKCGKPFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGDGHAPHTVESCDQFVDEEEDDYELDDDDDLDLEDNNNNNSNGNQGLRNDGLSNIEEGVFAAVVVMVCVNVVITIVHSKRERDREREKECEKMETNSEMKGNKVLALNAGSGSLI* | 379 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo15g1291 | 378 | MobiDBLite | consensus disorder prediction | 346 | 366 | - | - | |
Amo15g1291 | 378 | PANTHER | ZINC FINGER PROTEIN WIP6 | 2 | 303 | - | - | |
Amo15g1291 | 378 | SUPERFAMILY | beta-beta-alpha zinc fingers | 199 | 236 | IPR036236 | - | |
Amo15g1291 | 378 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Amo15g1291 | 378 | MobiDBLite | consensus disorder prediction | 288 | 312 | - | - | |
Amo15g1291 | 378 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 133 | 153 | IPR013087 | - | |
Amo15g1291 | 378 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 131 | 158 | IPR013087 | - | |
Amo15g1291 | 378 | PANTHER | ZINC FINGER PROTEIN WIP2 | 2 | 303 | IPR043584 | GO:0003700|GO:0010468 | |
Amo15g1291 | 378 | Gene3D | Classic Zinc Finger | 173 | 263 | - | - | |
Amo15g1291 | 378 | SUPERFAMILY | beta-beta-alpha zinc fingers | 124 | 153 | IPR036236 | - | |
Amo15g1291 | 378 | MobiDBLite | consensus disorder prediction | 346 | 361 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo15g1291 | Amo-Chr15 | 101155039 | 101156910 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo15g1291 | 36 | 272 | C2H2 Transcription Factor Family | AT1G13290 | 71.545 | 3.31e-120 | 348 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Amo15g1291 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo15g1291 | - | - | aprc:113870355 | 437.958 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Amo05g4720 | 05 | 120830296 | 120831820 | Amo15g1291 | 15 | 101155039 | 101156910 | hybridization |