Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1267 ATGGCCACTGTAGCAACAAGTGGAATAGGAGCAGGGTTAACAAAGCTCCAAGCAAACAAAGGAAAGCACAACAAATCCCTCTTTCTGGGCCATGGATTCAGAATCAAACCTTCTTCTCTACCATGCAGCAGTAGAAAGAAGCCTCCTTTTCAAGTGTTTGCATTAGGTGGTGGTGGTGGTGCAAGTGAATGGGTTCTTGATTCCATTCACAACCTCTTTGTGGGTGTTGGGGTTGGTCTCCCTTGCACTGTGATGGAGTGTGGGGACCTAATTTATAGGAGCACACTACCAAAGTCAAATGGGTTGACTCTTACAGTTCCTGGTGCGGTTCTTGCTTTGAGTGCTCTCTCTTACCTTTGGGCCACACCTGGGGTTGCACCTGGTTTCTTTGACATGTTTGTTCTTGCTTTTGTTGAGAGATTGTTCAGACCCACTTATAGAAAGGATGACTTTGTTGTGGGCAAGAAGTTAGGGGAGGGATCCTTTGGAGTAGTTTATAGAGCAACACCGTCCAAGCCCTCTTCAAAGGAAGGTGACTTAGTCTTGAAGAAAGCTACTGAATATGGTGCCGTAGAAATTTGGATGAATGAGCGCGTACGGAGAGCTTGTGCAAGCAGCTGCGCAGATTTTCTATACGGGTTTCTTGAGAGCTCTTCAAAGAAGGCTCCCGAATACTGGCTTATATGGCGGTTTGAAGGGGATGCTACCCTAGCTGACTTGCTGCAGAGTAGAGAATTTCCATACAATGTTGAAACATTAATTCTGGGTGAGGTTCAGGACTTGCCGAAGGGAGTCGAAAGAGAAAACAGAATTATTCAAACAATCATGAGGCAACTGTTGTTTGCATTAGACGGTCTTCACTCAACTGGCATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTCTCTGAAGGGTCGCGAACATTCAAAATCATTGATCTTGGAGCTGCTGCAGATCTGCGAGTTGGCATTAACTATATTCCCAAGGAGTTTCTCTTGGATCCAAGATATGCCGCACCAGAGCAATATATCATGAGCACACAAACTCCATCTGCACCCTCGGCTCCTGTAGCAACTGCACTCTCACCGGTTTTATGGCAGTTGAATTTGCCCGACAGATTTGATATCTATAGTGCTGGTCTGATCTTTCTTCAAATGGCATTCCCGGGTTTACGCACCGATAATGGCCTTATACAATTCAACCGTCAATTAAAGAGGTGCGACTATGACTTGGTTACTTGGAGAAAAAGCGTAGAGCCTCGATGTGGCCCTGAACTTAGGAGGGGATTTGATTTGTTGGATTTAGATGGTGGAATAGGATGGGAACTTCTGACATCAATGGTTAGATACAAAGCAAGGCAAAGGCTGAGCGCAAAAGCGGCATTGACTCATCCTTTCTTCGATAGAGAAGGTTTGTTGGCACTATCTTTCATGCAAAATCTGAGGCTGCAGCTCTTACGAGCGACTCAGCAGGATTACGGAGAAGCTGCCAAGTGGGTCACTGAGCTAATGGCAAAATCAGGAACTGAGAAGGATGGTGGATTCACTGAAGCTCAGCTCCTTGAACTAAAAGAAATTGAACCCAAGAAGAAGAAGAAGGCTAATGCACAGAGAAACGCTCTAGCTTCTGCACTTAAACTTCAGAGGAAAATCATTAAAACCTTAAATGAGAGTATGGATGAGCTCAGCAGACGCAGGAAAAGCATTTGGTGGAGCAGGTGGATCCCAAGAGAGGAATGA 1743 0.4515 MATVATSGIGAGLTKLQANKGKHNKSLFLGHGFRIKPSSLPCSSRKKPPFQVFALGGGGGASEWVLDSIHNLFVGVGVGLPCTVMECGDLIYRSTLPKSNGLTLTVPGAVLALSALSYLWATPGVAPGFFDMFVLAFVERLFRPTYRKDDFVVGKKLGEGSFGVVYRATPSKPSSKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFLYGFLESSSKKAPEYWLIWRFEGDATLADLLQSREFPYNVETLILGEVQDLPKGVERENRIIQTIMRQLLFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRTDNGLIQFNRQLKRCDYDLVTWRKSVEPRCGPELRRGFDLLDLDGGIGWELLTSMVRYKARQRLSAKAALTHPFFDREGLLALSFMQNLRLQLLRATQQDYGEAAKWVTELMAKSGTEKDGGFTEAQLLELKEIEPKKKKKANAQRNALASALKLQRKIIKTLNESMDELSRRRKSIWWSRWIPREE* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1267 580 Gene3D Transferase(Phosphotransferase) domain 1 259 472 - -
Amo15g1267 580 Pfam Protein kinase domain 152 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1267 580 Gene3D Phosphorylase Kinase; domain 1 137 230 - -
Amo15g1267 580 Coils Coil 546 566 - -
Amo15g1267 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 15 580 IPR044803 GO:0004674|GO:0009579
Amo15g1267 580 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 15 580 - -
Amo15g1267 580 ProSitePatterns Protein kinases ATP-binding region signature. 157 183 IPR017441 GO:0005524
Amo15g1267 580 ProSiteProfiles Protein kinase domain profile. 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1267 580 CDD STKc_SNT7_plant 155 468 - -
Amo15g1267 580 SMART serkin_6 151 468 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo15g1267 580 SUPERFAMILY Protein kinase-like (PK-like) 145 471 IPR011009 -
Amo15g1267 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 291 303 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1267 Amo-Chr15 99444945 99450818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1267 268 469 Core Cell Cycle Gene Families AT2G38620 31.163 4.04e-17 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Amo15g1267 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1267 - - gmx:100778588 900.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4736 05 121309280 121315120 Amo15g1267 15 99444945 99450818 hybridization