Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1250 ATGCCTCCCATGGCAACAATTCCAACACACAGACCTGAGTTGCATGCTTTGTTCTTCAATCGGTCCATTAGCTGTTTCAAATGCCCAAAAATTGTTGCCTCATGGTCCATGGCACATACGAAATCTTCCCCGATGTTGGAAAACACTAATGATAATAAGACGACGACTAATTTGAAGAAGAAAGAAGAACTTTGTGTGCAGCATTTAAGGCCACCGACTCCAAAAACCGAAACTTTAGGGTCCAAGAATCTTTGGTTTGAACGGTTGCAGCCATCTGGTCAAGAAGTGGCTCAAGGAAATAGGTTTGAATTCGGGGAATTTGTTGCGCGTGAAGCTGTGCTTGATGAAGAATATTGGACAGCGGCATGGCTGAGATCAGAATGTCAATGGGAGAATAGAATGTATGAAAGATATATTGATAACTTCAAGAGGAAATTCGCTGAGCAGGAATTTATTGCGTTAAGAAGGCGGTGCAAGGTTCTAAATGGGGAGACTTGCACATGCATTATCACGGTAAGGAAGCAGCACAACAATTTAAAACATTCAGTATTAAAAAGTGTTGTGGGAACCCTTGATTTGAATATCCGCTATTTGCTGCAAGGCGAGACCTTTCCCGGGGAACACGTAAAGGCTCCACTTTTTGTTAGCATCGACAGAACGGCACCGAGCAGATATGGCTACATTGCAAACTTATGTGTCACCAAACCAGCTCGACAACAGGGAATAGCGAGCAACATGTTATATTTTGCTATTGAAGCTGCAAAATATAATGGGGTGACTCAAATATATGTTCATGTTGATAGAAATAATAGGCCTGCACAGATGTTGTACCAGAAGTTGGGCTTCCAGATGGTTGAGACGGCAAACACCAAATTGTCGCTAGAGGAAACATTCTTGCTACGTTTGCAGACTTAA 915 0.424 MPPMATIPTHRPELHALFFNRSISCFKCPKIVASWSMAHTKSSPMLENTNDNKTTTNLKKKEELCVQHLRPPTPKTETLGSKNLWFERLQPSGQEVAQGNRFEFGEFVAREAVLDEEYWTAAWLRSECQWENRMYERYIDNFKRKFAEQEFIALRRRCKVLNGETCTCIITVRKQHNNLKHSVLKSVVGTLDLNIRYLLQGETFPGEHVKAPLFVSIDRTAPSRYGYIANLCVTKPARQQGIASNMLYFAIEAAKYNGVTQIYVHVDRNNRPAQMLYQKLGFQMVETANTKLSLEETFLLRLQT* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1250 304 CDD NAT_SF 214 265 - -
Amo15g1250 304 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 214 301 IPR000182 GO:0016407
Amo15g1250 304 Pfam Acetyltransferase (GNAT) family 161 282 IPR000182 GO:0016407
Amo15g1250 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 304 - -
Amo15g1250 304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 219 287 IPR016181 -
Amo15g1250 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 304 - -
Amo15g1250 304 Gene3D - 119 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1250 Amo-Chr15 98200221 98203286 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo15g1250 Acetyltransf_1 4.8e-11 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1250 - - gmx:100795426 425.631