Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1247 ATGAGCCAAGCTCCATTCCGCGAATCTTGGCTAGCCGGCCAATATAACTGCTATGCAGGTTTTGCCTCGTGCGATCTTTATCCACACGTGCATCAGCATGGACCTTACATTGAATCTGAGCTCATTTCCTTTCTTGGGTCAGCTGGATCACTCTTTGACTTGACACTTCCTCTCTTTAGGCGCAACGACACGTGCACCAACTTCGTGATTCATCTCTGCGAAGCTCTGAACAACGAACAGCAAGTCAAAGTGGTCATAGATGAGGATCTCCCAAAGGGGCAGAGCATAGGGCCTTCACTCTCAAAGGCTATTGAAACGACTTCATCTTCTTTTTTTTCTCCTCTAATTCAAAATTATGATAATTCTCTTGCTCCATTTTTTCCAATTTATTCAATTTCTTTTAACACAACTACCACCACAAGCAAAGAGAGGTTTGGGCTCAAGAGAAAAACAGGGATAAGTCTTGTGTATTTGATCAACAAAGAGATTGACGAAGAGCTTCTTCAGGAAGTGGTTAATATGGGATTTGACAGAAATCAATTGGTTGAATCTTTATGCAACAGGATCCAAAATGAGATGGGGCCGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGCAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAAGGTCACATTGAATTGAAATCTCCCAAATACGATCTTCTGTCGAACAAGATATTTAAAGAACAAGATTTTTTTCTCTTCTATCAGAAGGTTAATAACTTTTATTAG 780 0.4064 MSQAPFRESWLAGQYNCYAGFASCDLYPHVHQHGPYIESELISFLGSAGSLFDLTLPLFRRNDTCTNFVIHLCEALNNEQQVKVVIDEDLPKGQSIGPSLSKAIETTSSSFFSPLIQNYDNSLAPFFPIYSISFNTTTTTSKERFGLKRKTGISLVYLINKEIDEELLQEVVNMGFDRNQLVESLCNRIQNEMGPVMICLKSYGGCAGPLMDVPCVQDRVFYFPQGHIELKSPKYDLLSNKIFKEQDFFLFYQKVNNFY* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1247 259 CDD UBA_SnRK1_plant 163 192 - -
Amo15g1247 259 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 162 185 IPR015940 -
Amo15g1247 259 Pfam TIR domain 59 106 IPR000157 GO:0007165
Amo15g1247 259 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Amo15g1247 259 Gene3D - 58 122 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1247 Amo-Chr15 97862235 97873998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1247 206 229 B3 DNA Binding Superfamily AT4G23980 75.000 2.99e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1247 K07198 - ahf:114925841 186.808