Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1244 ATGGGCGACGGCAAGGTATCCGCGACGCTCTCTTCTCCTCCAAGCCCTCCGATTCCAAAGCTTCGGGACTACTCTCTCACTCTCAACTCGATCTTACGCTGTCACTCTCAACTCCCATCTCTCAACCCTGGAAGAGCTCAGATCCCCGCCGTCACCAGCACCGTCCTCGCTGTGCCATTAGCCTCCCCTCGGACTCGTCTCCCCCTCGTCACTAGGGTCGCCCTCCTCGCCGATCTCCTCTGCATCGTCAGTGTCGTCTCTCTCTCTGCTCCCAACGCTAACTGCAATAGGGTTGCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCTTGGTTCTCCAGAGGCTTTTACACTAGCCAACTGGATCTGCTGCAGTTATAGGCAAATCTGCATCTGTTGTATTGTTTATTATTTGGGGGCAGAGTTGCTGAGATTTGATTCTCTCATTGGTGAGTCAGTGCTTAAACATTTATGGCATCATCAGGATGCCATCTTGTGCTGTTCTTTGAAGTCGGTGCCGGTGTTTATCTTTGCAAACCAGGCTGGCCTTGACATGTTGGAAACAACTTTGGTGGCTTTACAAGACATCACATGGTGCCTTGTAATAACTCCATCTTGTGAAGGCAGAGAAAGCTAG 657 0.5099 MGDGKVSATLSSPPSPPIPKLRDYSLTLNSILRCHSQLPSLNPGRAQIPAVTSTVLAVPLASPRTRLPLVTRVALLADLLCIVSVVSLSAPNANCNRVAMAISPSGINPAVGSKLSLGSPEAFTLANWICCSYRQICICCIVYYLGAELLRFDSLIGESVLKHLWHHQDAILCCSLKSVPVFIFANQAGLDMLETTLVALQDITWCLVITPSCEGRES* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1244 218 Pfam MEKHLA domain 124 211 IPR013978 -
Amo15g1244 218 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 96 204 - -
Amo15g1244 218 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 96 204 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1244 Amo-Chr15 97531068 97532541 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1244 93 218 Homeobox Transcription Factor Family AT5G60690 63.780 2.47e-40 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1244 K09338 - aip:107640931 190.274