Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1231 ATGGCTTCACTACTGTCTCCCGCACTTGTCTTGTTTGCTGTAAGACTTTCAGGATTTGCAGTTGGACTCCTTGTTCTGTTCTGGGTCCTTGCCTTTAAATCCACCTTTCTCCCTTCTTCTCTTTCCCAACAAGACTTCATCTATGCTGTTCTTCATCCTTTGCTGATGGTCATTGGGTTTATTATCTTAAGTGGAGAAGCAATTTTGGTGCACAGGTGGTTGCCTGGTTCTATGGGATTAAAAAAATCAGTGCATTTAGGGCTTCAAGGTGTGGCACTAGCTTCTGGAATATTTGGAATTTGGACTAAATTTCAGGGGAAGGATGGGATTGTAGCCAATTTCTATAGTCTTCATTCATGGATGGGTTTGATTTGCACTTCCCTCTTTGGAATTCAGTGGTTGTTAGGCTTCTTGAACTTTTGGCACAGAAGAGAGGCAAAGATTGCGAGAATAAAGATTTTACCTTGGCATGTATTCTTGGGCCTATACACTTATGCGTTGGCAGTAGCAACAGCGGAAACAGGGCTTCTGGAGAAATTAACACTCATACAAACAAAGAGAAATAATGTATCCAAACACAGTGCTGAGTCCATATTGGTTAATAGTTTAGGATTATTTCTAGCCATGCTAAGTGGTTTTGTTATTCTGGCTGTTGTTTCACCTAAGTATGGGTATCATACCCTTCAAATTAGACAACATTAA 702 0.4046 MASLLSPALVLFAVRLSGFAVGLLVLFWVLAFKSTFLPSSLSQQDFIYAVLHPLLMVIGFIILSGEAILVHRWLPGSMGLKKSVHLGLQGVALASGIFGIWTKFQGKDGIVANFYSLHSWMGLICTSLFGIQWLLGFLNFWHRREAKIARIKILPWHVFLGLYTYALAVATAETGLLEKLTLIQTKRNNVSKHSAESILVNSLGLFLAMLSGFVILAVVSPKYGYHTLQIRQH* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1231 233 ProSiteProfiles Cytochrome b561 domain profile. 13 219 IPR006593 -
Amo15g1231 233 PANTHER CYTOCHROME B561-RELATED 6 225 IPR043205 GO:0016491
Amo15g1231 233 SMART 561_7 51 176 IPR006593 -
Amo15g1231 233 Pfam Eukaryotic cytochrome b561 51 181 IPR006593 -
Amo15g1231 233 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 4-RELATED 6 225 - -
Amo15g1231 233 Gene3D - 3 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1231 Amo-Chr15 96389272 96408584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1231 8 227 Chloroplast and Mitochondria Gene Families AT1G26100 61.818 6.36e-84 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1231 K08360 - gmx:100527512 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4765 05 121832463 121851263 Amo15g1231 15 96389272 96408584 hybridization