Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1214 ATGAAAAATCGAGTTAGGGAGCCAAAACCAGAGACAAGATGTGGTTGTATGAGTAAACTTCATATTTTCTTCGATACGGTAACTGAGAGTTGGGTAGTGAGAGATTTTTGTGATGAACATAACCATGAGCTGGTTGTTCCAAAGTTAGCAAGAATGTTAAGATCTCACAAGAAAATGACTGAGCCTGACACTAACTTTAAATCATCAACTGGACAACCTGTGATGCAGACACACTTTCAACAATTAGAAAGGTCAACAGCTACCATTTATACCCAGAAAATTTTTATGTTGTTCCGTTCAATGCTCCACAAGGCCAGCACATTGAAGGTAATATATGAAAAGGAAATGAGTTCCTGCAAGATTTATCAGGTGTCAAAATGTTATAATCCTAACATGATATGGCATGTGTTTTTTCACGAAGAGCAAGATGAATTTAAATACTCATGCATGAGAATGGACTCTATAGGTATTCCATGTAGTCATATACTTGTTATTTTAGGTTTTCTAGACATTGCGGAGCTGCCAAAATCATTAGTGCTGCGAAGATGGACTAGAAAAGCGAAGGAAGGCATTAGTGGGTATGATGACATGGGTGGCTTGATGGAGGATTCCTTGGCTATCAGTCGGCGTGCATGTTTGGCACATTGGTGTAAACAAATTATGAACGAAGGGTGCCTAAAAGGGGATCCTTTTAATGAATCACGAGATGCATTGGTAAATATACTTTCATGGATTAGGGCTCATAGTGGGGACAATAACATGGAGGAGCATGCAGAATACATGTATGAAGACCTTGCAAAGAATGGAAGTACCGAGATAGAGACCACAAGGAAGCCTAAGCGTTGCAGCTACTGTCGCAAGGGAGGTAATAACATTGCTACGTGTTCCGTGAGGAAAATGGATGAAAGGACTCCCCAATTTGATGATGACGCTGAGGAGAATATTGAGGGTGAAGACTACTCCTTCGTAGATGCTGAAAGTGATGGGTATGTTCACACTGAATGGTTTGAAGAGGAAGATGAATATTTAGATTCCTCAAGGTATTACGAACAGAGTGGTGGTGAGACTGAGTCCTCAATGGATTATGATTCTGGGGCAAATGATGATGATGAGGTAGAGTTGTGA 1125 0.4036 MKNRVREPKPETRCGCMSKLHIFFDTVTESWVVRDFCDEHNHELVVPKLARMLRSHKKMTEPDTNFKSSTGQPVMQTHFQQLERSTATIYTQKIFMLFRSMLHKASTLKVIYEKEMSSCKIYQVSKCYNPNMIWHVFFHEEQDEFKYSCMRMDSIGIPCSHILVILGFLDIAELPKSLVLRRWTRKAKEGISGYDDMGGLMEDSLAISRRACLAHWCKQIMNEGCLKGDPFNESRDALVNILSWIRAHSGDNNMEEHAEYMYEDLAKNGSTEIETTRKPKRCSYCRKGGNNIATCSVRKMDERTPQFDDDAEENIEGEDYSFVDAESDGYVHTEWFEEEDEYLDSSRYYEQSGGETESSMDYDSGANDDDEVEL* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1214 374 MobiDBLite consensus disorder prediction 341 374 - -
Amo15g1214 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 68 312 - -
Amo15g1214 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 6 62 - -
Amo15g1214 374 Pfam FAR1 DNA-binding domain 3 45 IPR004330 -
Amo15g1214 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 68 312 IPR031052 GO:0006355
Amo15g1214 374 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 62 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1214 Amo-Chr15 95014031 95016221 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo15g1214 FAR1 1.9e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1214 - - ahf:112719698 583.948