LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo15g1193	ATGTCAGCCGCGTCGCCTTCACCGGCAGCTTCTGGCGACACTCAACCGCCACAACAACCACCACCATCACCACCTGCTTCGCCTGCACCTGACACTTCAGCTTCGCCACCGCCGCTGTCGCCGACGCCACCACTACCTTCGACTTCAACCACGCCATCTCAGTCCCCGCCACCAACGACCACAACGCCATCTTCTCCTCCTCCAACCGCCCCGCCGCCGGTGCAACCGTCACCTACGCCGTCCGAACCACCGCCTCCTGCTTCACCTCCTCTTTCGTCTGGAAACCCGCCTCCAAGAGCTCCTCCACCAACCCCGCCGCAATCAGACCCTCCCCAATCGCCACCACCATCTCCGCCACCGCCATCACCGGCCCCACCGAGAAGCTCTCCACCACCATCGAACCCCCCTCCCACGCCTCCATCAAACCCTCCTAAGAGCACATCTCCGCCGCAACAGTCACCGCCACCGGAGAATTCACCACCCCCTGCACCTTCTCCTCCAACAACAGCCGCGCCGCCACCACGAGGCTCCCCTCCCCCGCCACGGTCTGCGCCACCACGAGGCTCCCCACCCCCGCCACGTCCCGCATCTGTGCCGCCGCCAAGATCATCGCCACCGCCGTCATCAAACCCTACTTCCCAAAATTCATCTCCTCCTTCGACTTCCACGTCTCCCCCAAGATCTGCACCTCCTCCTCCTCCTCCCACAACACCTAGCACTCAACCAGCTCCTTCAAATTTTCCACCTAGGTCATCATCATCCCCACCACCGCCAAATCAGTTGGCGCCGCCTCCGGCATCCATTCTTACTCCACCTGGAAACGGATCACAGACAGAGAATTCAGGTCCTACAGCTGGAGGAGGTGGTAATGGAATTGGTACCGCTGCAATAGTGGCTATCAGTGTAGCGGCGGGAATTCTGCTGTTTGGGATCATTGGAGTTGCAATTTGGTGCACGATAAAGAGGAAAAAGAAAAAGGTGCTGAGCAATGGTGGTTACGTCATGCCAACAACTCCTGCCTCATCTCCTGATTCAGATTCCTCATTCTATAAGACGCATTCTTCAGCTCCTCTTGTACAAAGCGGCTCTGGCAGTGATGTTTTGTATACACCATCTGATCCTGGTGGACTAGGCCACTCAAGGTCGTGGTTTTCGTATGAAGAATTAATCAAGGCCACAAATGGTTTCTCAACTGAAAATCTCTTAGGCGAAGGTGGATTTGGTTCCGTGTATAAAGGATACCTGCCGGATGGGAGAGAGATAGCGGTCAAACAGCTGAAAATTGGTGGTGGTCAGGGAGAGAAAGAATTCAAAGCTGAAGTCGAGATTATTAGTCGCATACATCATCGTCATCTGGTTTCACTGGTTGGATATTGTATTCAAGATACCAGAAGACTGCTTGTCTATGACTATGTCCCCAATAATACCCTTTATTTTCATCTACATGGGGATGGTAGGCCGGTGTTAGAGTGGGCAAACCGTGTTAAAATTGCAGCTGGTGCAGCTCGAGGGATAGCTTATCTCCATGAAGACTGTAATCCTCGGATTATTCACAGGGATATCAAGTCATCGAACATTCTTTTAGATTACAACTTCGAGGCTAAAGTTTCAGATTTTGGGCTAGCAAAATTAGCCCTAGATGCAAATACACATATAACCACACGAGTCATGGGAACTTTTGGGTACGTAGCCCCTGAATATGCATCCAGTGGCAAATTGACTGAGAAGTCTGATGTATATTCCTTTGGGGTTGTGCTCTTGGAGCTCATTACTGGGCGGAAGCCAGTAGATACATCTCAACCCTTGGGAGATGAGAGTTTAGTTGAATGGGCTCGACCATTATTGAGTCATGTACTTGATAGTGGGGAGTTGGGGATTTTGACGGATCCAAGGCTAGAAAAGAACTATGTTGAAAGTGAAATTTTCTGTATGATAGAAGTTGCTGCATCTTGCGTTCGGCATTCAGCTGCAAAGAGGCCTCGCATGGGACAGGTTGTTAGAGCTTTTGATAGCTTAGGAGCTTCTGACCTAACGAATGGATTGCGAGTTGGAGAAAGCGAGGCTTTTAACTCTGCGCAGCTATCGGAAGAGATAAGATTGTTTAGGAGAATGGCATTTGGTGATCAAAATTATAGCACCGATTTCTTTAGCAAGGGTAGTTCAAATACGTGA	2172	0.5129	MSAASPSPAASGDTQPPQQPPPSPPASPAPDTSASPPPLSPTPPLPSTSTTPSQSPPPTTTTPSSPPPTAPPPVQPSPTPSEPPPPASPPLSSGNPPPRAPPPTPPQSDPPQSPPPSPPPPSPAPPRSSPPPSNPPPTPPSNPPKSTSPPQQSPPPENSPPPAPSPPTTAAPPPRGSPPPPRSAPPRGSPPPPRPASVPPPRSSPPPSSNPTSQNSSPPSTSTSPPRSAPPPPPPTTPSTQPAPSNFPPRSSSSPPPPNQLAPPPASILTPPGNGSQTENSGPTAGGGGNGIGTAAIVAISVAAGILLFGIIGVAIWCTIKRKKKKVLSNGGYVMPTTPASSPDSDSSFYKTHSSAPLVQSGSGSDVLYTPSDPGGLGHSRSWFSYEELIKATNGFSTENLLGEGGFGSVYKGYLPDGREIAVKQLKIGGGQGEKEFKAEVEIISRIHHRHLVSLVGYCIQDTRRLLVYDYVPNNTLYFHLHGDGRPVLEWANRVKIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEAKVSDFGLAKLALDANTHITTRVMGTFGYVAPEYASSGKLTEKSDVYSFGVVLLELITGRKPVDTSQPLGDESLVEWARPLLSHVLDSGELGILTDPRLEKNYVESEIFCMIEVAASCVRHSAAKRPRMGQVVRAFDSLGASDLTNGLRVGESEAFNSAQLSEEIRLFRRMAFGDQNYSTDFFSKGSSNT*	724

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo15g1193	723	PANTHER	BNACNNG34790D PROTEIN	104	719	-	-
	Amo15g1193	723	MobiDBLite	consensus disorder prediction	13	213	-	-
	Amo15g1193	723	PRINTS	Proline rich extensin signature	40	57	-	-
	Amo15g1193	723	PRINTS	Proline rich extensin signature	64	89	-	-
	Amo15g1193	723	PRINTS	Proline rich extensin signature	22	38	-	-
	Amo15g1193	723	PRINTS	Proline rich extensin signature	1	22	-	-
	Amo15g1193	723	CDD	STKc_IRAK	402	672	-	-
	Amo15g1193	723	SMART	serkin_6	396	669	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g1193	723	MobiDBLite	consensus disorder prediction	271	287	-	-
	Amo15g1193	723	PANTHER	PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4	104	719	-	-
	Amo15g1193	723	Gene3D	Transferase(Phosphotransferase) domain 1	472	682	-	-
	Amo15g1193	723	MobiDBLite	consensus disorder prediction	1	287	-	-
	Amo15g1193	723	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	516	528	IPR008271	GO:0004672\|GO:0006468
	Amo15g1193	723	Gene3D	Phosphorylase Kinase; domain 1	376	471	-	-
	Amo15g1193	723	MobiDBLite	consensus disorder prediction	223	270	-	-
	Amo15g1193	723	ProSitePatterns	Protein kinases ATP-binding region signature.	402	424	IPR017441	GO:0005524
	Amo15g1193	723	ProSiteProfiles	Protein kinase domain profile.	396	672	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g1193	723	Pfam	Protein kinase domain	397	603	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Amo15g1193	723	SUPERFAMILY	Protein kinase-like (PK-like)	378	667	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo15g1193	Amo-Chr15	94640239	94644816	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo15g1193	291	665	Trihelix Transcription Factor Family	AT1G68690	71.011	0.0	573

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Amo15g1193		Pkinase	2.8e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo15g1193	-		-	vun:114173712	756.518