Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1192 ATGTGTTTATCGTCTAATCATGTCTCAGATGCACTGGATATAGAGAAGTGGCGATTCATAAGCCAAAGTCCTGGAAAATCAGTTGGGATCAGTTCAGTGCTTCTAGGACTTATCCTAGTTGGAAGAGCAACATTTGTTTTCCCTCTCTCATTCTTATCCAATTTGCTCCAGAAATCCCCACATGTGAAAATTGACATGAAGCAACAAGTCACAATTTGGTGGTCTGGTCTCATGCGAGGTGCTGTTTCTATAGCACTTGCTTACAACCAGGTGAAGTAA 279 0.4158 MCLSSNHVSDALDIEKWRFISQSPGKSVGISSVLLGLILVGRATFVFPLSFLSNLLQKSPHVKIDMKQQVTIWWSGLMRGAVSIALAYNQVK* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1192 92 Pfam Sodium/hydrogen exchanger family 27 87 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo15g1192 92 PANTHER SODIUM/HYDROGEN EXCHANGER 10 90 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo15g1192 92 PANTHER SODIUM/HYDROGEN EXCHANGER 3 10 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1192 Amo-Chr15 94463852 94464584 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1192 10 90 Antiporters AT3G05030 71.605 6.20e-37 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1192 - - ahf:112742337 163.696