Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Amo15g1172 | ATGGCACATTGTTCTCTTTTTCCAAAATCCTACTTCCTTCATGTTGTTCTCATTATGTTCAYCTTTCTTGTGGCTACAAGATTGTATGCAAGTGAACCTCCTCTTACGCTCGATTACTACGCATCGACTTGTCCCACTGTGTTTGATGTTATAAGGAAGGAAACAGAATGTGCCGTGCTCTCTGATCCGCGCAACGCGGCCATGATAGTTCGGCTGCACTTCCATGATTGCTTTGTTCAGGGATGCGATGCATCAAATTTGCTTGATGACACCGTCACACTTAAAGGTGAAAAGAAAGCAGCTACCAACATCCACTCTTTGAAAGGATTCGAATTAATTGATCAGATCAAGAACATGGTTGAGTCCGAGTGCCCCGGAATTGTCTCGTGCGCTGATATTCTTACAATTGCAGCTAGAGATGCTGTGATTCTGGTAGGTGGACCATATTGGGATGTTCCTGTGGGAAGGAAGGATTCTGTAACTGCAAATATTGATCTTGCAAACACCAATCTTCCCACTCCAGATGAAAGCCTTCTCTCTATCATTTCCAAATTTCTTTATCAAGGCCTCTCTGTCACAGATATGGTAGCCCTATACTTCAGATCAAGAATCTATGGGGACTACGGATTCACTTCAGTGAAGAATCCAGTTTCAGAGAGCCAACTCAGCAACCTAAGATCTATGTGTCCACCAATTGGAGGAGGAAGAACAGACAATAACATATCAGCAATGGATTATGTTACCCCTAACCTCTTTGACAACTCTTTCTACCAATTGCTCCTAAATGGTGAGGGACTTCTCAACTCAGATCAGGAAATGTACTCAAGTGTGTTTGGAATCCAAACAAGGGAGCTTGTTAAGAAGTACGCGACGGATCCTCTGGATTTCTTCAGGCAATTCTCTGAATCCATGGTGAAGATGGGAAACATTACGAATTCCGAGAGCTTCGTAACGGGAGAAGTCAGGAAGAACTGCAGATTTGTCAATACATGA | 993 | 0.431 | MAHCSLFPKSYFLHVVLIMFXFLVATRLYASEPPLTLDYYASTCPTVFDVIRKETECAVLSDPRNAAMIVRLHFHDCFVQGCDASNLLDDTVTLKGEKKAATNIHSLKGFELIDQIKNMVESECPGIVSCADILTIAARDAVILVGGPYWDVPVGRKDSVTANIDLANTNLPTPDESLLSIISKFLYQGLSVTDMVALYFRSRIYGDYGFTSVKNPVSESQLSNLRSMCPPIGGGRTDNNISAMDYVTPNLFDNSFYQLLLNGEGLLNSDQEMYSSVFGIQTRELVKKYATDPLDFFRQFSESMVKMGNITNSESFVTGEVRKNCRFVNT* | 331 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Amo15g1172 | 330 | Pfam | Peroxidase | 52 | 292 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | Gene3D | Peroxidase, domain 2 | 172 | 307 | - | - | |
| Amo15g1172 | 330 | PANTHER | PEROXIDASE 72-RELATED | 25 | 328 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 108 | 121 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 68 | 88 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 302 | 315 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 146 | 161 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 259 | 276 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 243 | 258 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 44 | 63 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Plant peroxidase signature | 127 | 137 | IPR000823 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Haem peroxidase superfamily signature | 128 | 145 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Haem peroxidase superfamily signature | 66 | 80 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Haem peroxidase superfamily signature | 245 | 260 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | PRINTS | Haem peroxidase superfamily signature | 146 | 158 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | ProSiteProfiles | Plant heme peroxidase family profile. | 34 | 329 | IPR002016 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | SUPERFAMILY | Heme-dependent peroxidases | 35 | 329 | IPR010255 | GO:0004601|GO:0006979|GO:0020037 | |
| Amo15g1172 | 330 | ProSitePatterns | Peroxidases active site signature. | 66 | 77 | IPR019794 | GO:0004601 | |
| Amo15g1172 | 330 | Gene3D | - | 38 | 329 | - | - | |
| Amo15g1172 | 330 | PANTHER | PEROXIDASE 11 | 25 | 328 | - | - | |
| Amo15g1172 | 330 | CDD | secretory_peroxidase | 35 | 328 | IPR033905 | GO:0004601|GO:0042744 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Amo15g1172 | Amo-Chr15 | 92791337 | 92795582 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Amo15g1172 | 34 | 330 | Peroxidase | AT1G68850 | 69.903 | 6.00e-161 | 451 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Amo15g1172 | K00430 | - | gmx:100780750 | 552.362 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Amo15g1172 | 15 | 92791337 | 92795582 | Amo15g1172 | 15 | 92791337 | 92795582 | ECH |