Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g1164 ATGCCACCACGTGCTTCGACGATCTCTTTTCCCGTTGTCTCTTCCGTCGATGCAACCCATGCCTTCGAGCCTCGCAACGGTGAAGAAAGCAACGAACAGCAAAGCTTCTCCTCCAAAAACAAATTCTCTTCCCGAAATGCTTCTTCCAAGACGATTTCGTTAAGATGGATAGGACTGAGATTGGATTGTGTTGAAAAGTGTTGTGCTTGCCCTTATAGATTGGATTTAATGCTGCAATGTGGATTCGATTTGATTCCGAATCATGTAGCTATTAAAATTGCTCTTGAACTGAAGAAGCTCCTCATTGACAATAGTCTTCTATATGTCTCTCAGTCCAATTTGGAGGTCAACTTATTCAAGGTAATGGAGAGGCGGGGATATAGAGAAGAGTACATTAGTCATTATAAGATGATGACAAGGTTTCATCATCAAAGAGTTCCATTGGTAATCCTTGTTTGTGGCACTGCTTGTGTTGGGAAGTCTACTATTGCCACCCAGCTTGCGCAGAGGCTAAATTACCAAATGTGTTGCAGAATAGCATGCTTTGTCATCTTTAAAGCAAATTTGATGTTAGGGGCTGGTGTTAGTCAGGTCATCGTTAGTGGCAAGTTGAGGGCTCAGCGCGCTAAATCCATGAAGTTCAAGGACGGGTACATGATTTCCTCAGGGCAACCAGTCAAGAACTGCATTGATTCTGCTGTAAGACATGCATATACGAGCGAGTTGCAGCTTAAATTTTATGGCAGAGCATATATGCATGTTGTCATTGACAATTGCAATAAAGGCAAAGAGAAAACTCAATTGAAATTGGACTGGTCAACAAGGCGCAAGATTTGTATAGGCGTTGCTAAAGACTTGGCTTACCTCCATGGAGAGTCAAGATTAAAAATAGCCAACAATTTTGATTGGATCATCAGGAGTGAAGAGAACGTTACAAAAAAAGTAGTTCAGGCTATGACTACAAATAACGAATCAATCGTCCCTTCTTCCATGTTTGAGCAGCTCTTGGCTTGGGAGAAGAAGTTCTACAAAGAAGTTAAGGTTCAAATTATAACCCTCACTGCTGCGGGCGAAAGGGACGGCAGCAGCCATGATCGTGAGGGCTTCTTTGACAGTGATGTCGGAGCTCGTGCAAGAGCTGCCCATGGAAGAAGTCGGCGACCAGCAGACTTGAGGAATAGGTTGCGTCGAGGTGGGGATGACTGCATCAGAACTGGCGAGATTGAGCCAGTTGTGACTGCTGTCGACGAGCGTGGATGTGGCGTTGAGGGCGGGGCAGACCTGCAGGAAGCCAGAAGCATTATCAGGGCTGATGGTGGGGCAAAACTGCAGGGGAGGGGAGCCGGTAAGGCTGCTGACTCTGATTCCAATAAGCTTTTGGAGGAGAGAGGCGTGACTCTAGAGGGGGGCCGCGTTCAAGGGAGAGGTGTGATTACAGAGACTTGTGACACAATTGGAGACCAGCTACCACTAGAATCAATTGGAGTTCAGGGTCATGGGCAA 1503 0.4597 MPPRASTISFPVVSSVDATHAFEPRNGEESNEQQSFSSKNKFSSRNASSKTISLRWIGLRLDCVEKCCACPYRLDLMLQCGFDLIPNHVAIKIALELKKLLIDNSLLYVSQSNLEVNLFKVMERRGYREEYISHYKMMTRFHHQRVPLVILVCGTACVGKSTIATQLAQRLNYQMCCRIACFVIFKANLMLGAGVSQVIVSGKLRAQRAKSMKFKDGYMISSGQPVKNCIDSAVRHAYTSELQLKFYGRAYMHVVIDNCNKGKEKTQLKLDWSTRRKICIGVAKDLAYLHGESRLKIANNFDWIIRSEENVTKKVVQAMTTNNESIVPSSMFEQLLAWEKKFYKEVKVQIITLTAAGERDGSSHDREGFFDSDVGARARAAHGRSRRPADLRNRLRRGGDDCIRTGEIEPVVTAVDERGCGVEGGADLQEARSIIRADGGAKLQGRGAGKAADSDSNKLLEERGVTLEGGRVQGRGVITETCDTIGDQLPLESIGVQGHGQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g1164 501 MobiDBLite consensus disorder prediction 28 43 - -
Amo15g1164 501 SUPERFAMILY Ribosomal protein S3 C-terminal domain 161 239 IPR036419 -
Amo15g1164 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 128 174 IPR027417 -
Amo15g1164 501 Gene3D - 160 244 IPR036419 -
Amo15g1164 501 MobiDBLite consensus disorder prediction 23 43 - -
Amo15g1164 501 Gene3D Transferase(Phosphotransferase) domain 1 251 358 - -
Amo15g1164 501 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 85 174 - -
Amo15g1164 501 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 85 174 - -
Amo15g1164 501 Pfam Ribosomal protein S3, C-terminal domain 163 240 IPR001351 GO:0003735|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g1164 Amo-Chr15 92305750 92315231 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo15g1164 164 236 Cytoplasmic Ribosomal Protein Gene Family AT3G53870 55.844 9.84e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g1164 - - aip:107639128 267.314